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. 2009 Nov 13;4(11):e7757. doi: 10.1371/journal.pone.0007757

Table 4. PCR primers used in the present study.

Name Nucleotide sequence (5′ to 3′) Use
CB23 ACTTTACAGTTGCTAGATAAGC for PCR of Southern Probe A
CB24 AGCAGGTTACTTGTCCAGTC for PCR of Southern Probe A
CB107R AATTCTTTAGACCCTTCTTTGTTT for PCR of Southern Probe D
CB108F TGTCAATAATGCAGCTGATGATGGGCTTTCATTGTCTTCTCATTCTTAGATGAGCCCATGGATTCTAC for PCR of Southern Probe D
CB156F CAA GCAG GGG AAG GAG GC PCR detection ATE1-floxON
CB157R TTC AGG AGT TAG CCA TTG CC PCR detection ATE1-floxON and ATE1-floxOFF
AK49 GGT ATT TGC TGC CGT CCT TTG GTG GT PCR detection of ATE1-null
YT641 CTG TTC CAC ATA CAC TTC ATT CTC AG PCR detection of ATE1-null
AK83-Cbfix CTG GAG ACA AAG CCC CAG CCA GAC PCR detection of ATE1-null
Cre-1 GTT CGC AAG AAC CTG ATG GAC A PCR detection of Cre gene
Cre-2 CTA GAG CCT GTT TTG CAC GTT C PCR detection of Cre gene
CB159R AC TGT AGA ATC CAT GGG CTC PCR detection wild type ATE1
CB160F ACA GCA TAA GTG AGA CAC TCA PCR detection wild type ATE1
CB110F GTT TGT GTC ACC ACT CCT ACC PCR detection ATE1-floxOFF
oIMR0042 CTA GGC CAC AGA ATT GAA AGA TCT PCR detection IL-2 control
oIMR0043 GTA GGT GGA AAT TCT AGC ATC ATC C PCR detection IL-2 control
AgRP-for GCGGAGGTGCTAGATCCA RT-PCR
AgRP-rev AGGACTCGTGCAGCCTTA RT-PCR
NPY-for CTCCGCTCTGCGACACTAC RT-PCR
NPY-rev AATCAGTGTCTCAGGGCT RT-PCR
POMC-for ACCTCACCACGGAGAGCA RT-PCR
POMC-rev GCGAGAGGTCGAGTTTGC RT-PCR
MCH-for ATTCAAAGAACACAGGCTCCAAAC RT-PCR
MCH-rev CGGATCCTTTCAGAGCAAGGTA RT-PCR
cyclophilin-for GGTGGAGAGCACCAAGACAGA RT-PCR
Cyclophilin-rev GCCGGAGTCGACAATGATG RT-PCR
Ucp2-5′ GGGGCGGCCGCATGGTTGGTTTCAAGGCCAC RT-PCR
Ucp2-3′ GGGGCGGCCGCTCAGAAAGGTGCCTCCCGAG RT-PCR
Actb-5′ ATGGATGACGATATCGCTGCG RT-PCR
Actb-3′ GAAGCTGTAGCCACGCTCGG RT-PCR
Leptin-5′ GGGGCGGCCGCATGTGCTGGAGACCCCTGTG RT-PCR
Leptin-3′ GGGGCGGCCGCTCAGCATTCAGGGCTAACAT RT-PCR
Ucp1-5′ GGGGCGGCCGCATGGTGAACCCGACAACTTC RT-PCR
Ucp1-3′ GGGGCGGCCGCTTATGTGGTACAATCCACTG RT-PCR