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. 2009 Nov;151(3):1221–1238. doi: 10.1104/pp.109.143842

Table II.

Selected metabolites identified by GC-MS in bean nodules from –P- and +P-treated plants

Metabolite RI, Expected RI, sd Response Ratio −P/+Pa
Amino acids
    Gly 1,304.5 −0.17 −1.4
    β-Ala 1,424.7 −0.12 3.5
    Ser 1,252.9 0.09 −1.2
    Asn 1,665.8 −0.02 2.0
    Thr 1,290.9 −0.02 −2.0
    4-Hyp 1,518.0 0.21 −1.4
    Gln 1,767.6 −0.05 −1.5
    Leu 1,151.0 0.52 1.6
    Lys 1,847.3 −0.02 1.2
    Phe 1,553.1 0.15 2.4
N compounds
    Putrescine (agmatine)b 1,737.2 −0.24 −1.4
    Pipecolic acid 1,366.6 −0.16 −1.6
    Picolinic acid 1,327.2 0.20 1.5
    Spermidine 2,251.1 −0.22 −1.6
    Urea 1,235.6 0.06 −1.4
Organic acids
    Malonic acid 1,195.0 0.30 1.4
    Tartaric acid 1,625.9 0.03 −1.7
    Malic acid 1,477.3 0.11 1.5
    2,4-Dihydroxybutanoic acid 1,403.6 −0.08 −2.1
    cis-Aconitic acid 1,740.5 −0.02 1.6
    Citric acid 1,804.6 −0.04 1.2
    Vanillic acid 1,761.6 0.10 1.7
Polyhydroxy acids
    Glyceric acid 1,321.7 −0.02 −1.1
    Threonic acid 1,546.4 −0.04 1.4
    Galactonic acid-1,4-lactone 1,877.4 −0.31 1.3
    Galactaric acid 2,032.5 −0.22 1.5
    Galactonic acid 1,984.7 −0.29 1.8
    Gulonic acid 1,951.4 −0.21 2.0
Phosphates
    Glyceric acid-3-phosphate 1,790.2 0.06 −1.1
    Fru-6-P 2,292.8 −0.03 −2.2
    Glu-6-P 2,329.6 −0.13 −1.3
Polyols
    Threitol 1,485.1 −0.12 3.3
Sugars
    Fru 1,856.2 −0.24 −1.1
    Man 1,869.0 −0.17 1.4
    Suc 2,629.6 −0.28 2.2
    α,α′-Trehalose 2,730.1 −0.26 1.6
MSTscd
    [516; 1H-Indole-2,3-dione, 1-(tert-butyldimethylsilyl)-5-isopropyl-, 3-(O-methyloxime)] 1,691.2 −0.04 −2.4
    [771; α-d-Methylfructofuranoside (4TMS)] 1,760.9 −0.02 1.5
    [802; Methylcitric acid (4TMS)] 1,909.57 −0.06 1.2
    [965; Gluconic acid, 2,3,4,5,6-pentakis-O-(trimethylsilyl)-trimethylsilyl ester] 2,002.9 −0.27 1.6
    [834; 2-O-Glycerol-β-d-galactopyranoside (6TMS)] 2,160.3 −0.04 −1.5
    [926; Galactosylglycerol (6TMS)] 2,297.2 −0.12 2.4
    [802; Gulose (5TMS)] 2,424.3 0.26 −1.9
    [533; Lactose methoxyamine (8TMS)] 2,878.2 −0.10 1.3
    [882; Melibiose (8TMS)]
3,092.9
−0.27
2.6
a

The response ratio of average –P nodule response compared with average +P nodule response is listed (t test significance of P < 0.05 is indicated by boldface numbers for the response ratio). For ratios lower than 1, the inverse of the ratio was estimated and the sign was changed.

b

Represents the sum of two or more metabolites.

c

Reference substance not yet available.

d

MSTs are characterized by match factor and mass spectral hit.