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. Author manuscript; available in PMC: 2009 Nov 5.
Published in final edited form as: Proteomics Clin Appl. 2009 Jan 1;3(1):116–134. doi: 10.1002/prca.200800140

Table 3.

Distinct human salivary proteins

AC_V332 Description Num_Pep Num_Group
IPI00745705 LOC730924 similar to pancreatic α-amylase 89 4
IPI00374315 C6orf58 uncharacterized protein C6orf58 68 3
IPI00032294 CST4 cystatin-S 67 4
IPI00305477 CST1 cystatin-SN 59 4
IPI00013382 CST2 Cystatin-SA 58 4
IPI00304557 C20orf70 short palate, lung and nasal epithelium carcinoma-associated protein 2 49 4
IPI00007244 MPO isoform H17 of myeloperoxidase 45 3
IPI00060800 LOC124220 protein UNQ773/PRO1567 42 4
IPI00009650 LCN1 lipocalin-1 39 4
IPI00291410 C20orf114 isoform 1 of long palate, lung and nasal epithelium carcinoma-associated protein 1 39 3
IPI00025023 LPO lactoperoxidase 38 4
IPI00010796 P4HB protein disulfide-isomerase 38 3
IPI00026256 FLG filaggrin 37 3
IPI00031547 DSG3 desmoglein-3 35 4
IPI00002851 CST5 cystatin-D 34 4
IPI00025846 DSC2 isoform 2A of desmocollin-2 34 3
IPI00219525 PGD 6-phosphogluconate dehydrogenase, decarboxylating 32 3
IPI00186290 EEF2 elongation factor 2 32 2
IPI00008274 CAP1 adenylyl cyclase-associated protein 1 31 4
IPI00386755 ERO1L ERO1-like protein alpha 31 3
IPI00305622 TGM1 protein-glutamine γ-glutamyltransferase K 29 2
IPI00784295 HSP90AA1 isoform 1 of heat shock protein HSP 90-α 29 2
IPI00297056 CRNN cornulin 28 3
IPI00082931 SPRR3 small proline-rich protein 3 26 4
IPI00011285 CAPN1 calpain-1 catalytic subunit 26 2
IPI00027444 SERPINB1 leukocyte elastase inhibitor 25 4
IPI00291006 MDH2 malate dehydrogenase, mitochondrial 25 3
IPI00169383 PGK1 phosphoglycerate kinase 1 23 4
IPI00219077 LTA4H isoform 1 of leukotriene A-4 hydrolase 23 3
IPI00744692 TALDO1 transaldolase 23 3
IPI00031461 GDI2 Rab GDP dissociation inhibitor β 21 4
IPI00299729 TCN1 transcobalamin-1 21 3
IPI00303476 ATP5B ATP synthase subunitβ, mitochondrial 21 2
IPI00006560 SERPINB13 isoform 1 of serpin B13 19 3
IPI00007797 FABP5;LOC728641 fatty acid-binding protein, epidermal 19 3
IPI00025512 HSPB1 heat shock protein β-1 19 3
IPI00003817 ARHGDIB Rho GDP-dissociation inhibitor 2 18 4
IPI00453476 Uncharacterized protein ENSP00000348237 18 3
IPI00010133 CORO1A coronin-1A 16 4
IPI00012503 PSAP isoform Sap-mu-0 of proactivator polypeptide 16 3
IPI00550363 TAGLN2 transgelin-2 16 2
IPI00295741 CTSB cathepsin B 15 4
IPI00152154 MUC7 mucin-7 15 3
IPI00103242 POF1B isoform 1 of protein POF1B 15 1
IPI00004656 B2M β-2-microglobulin 14 4
IPI00220301 PRDX6 peroxiredoxin-6 14 3
IPI00000875 EEF1G elongation factor 1-γ 14 2
IPI00440493 ATP5A1 ATP synthase subunitα, mitochondrial 14 1
IPI00019038 LYZ lysozyme C 13 4
IPI00304808 KLK1 kallikrein-1 13 4
IPI00646304 PPIB peptidylprolyl isomerase B 13 4
IPI00291175 VCL isoform 1 of vinculin 13 3
IPI00296777 SPARCL1 SPARC-like protein 1 13 3
IPI00216984 CALML3 calmodulin-like protein 3 12 3
IPI00219446 PEBP1 phosphatidylethanolamine-binding protein 1 12 3
IPI00414320 ANXA11 annexin A11 12 1
IPI00013895 S100A11 protein S100-A11 11 4
IPI00009123 NUCB2 nucleobindin-2 11 3
IPI00335168 MYL6 isoform nonmuscle of myosin light polypeptide 6 11 2
IPI00010896 CLIC1;DDAH2 chloride intracellular channel protein 1 11 1
IPI00011937 PRDX4 peroxiredoxin-4 10 3
IPI00026185 CAPZB isoform 1 of F-actin-capping protein subunit β 10 3
IPI00060143 FAM3D protein FAM3D 10 3
IPI00006995 P11 placental protein 11 10 2
IPI00024145 VDAC2 isoform 1 of voltage-dependent anion-selective channel protein 2 10 1
IPI00296526 NAGK N-acetylglucosamine kinase 9 3
IPI00296713 GRN isoform 1 of granulins 9 3
IPI00008580 SLPI antileukoproteinase 9 2
IPI00026260 NME1;NME2 nucleoside diphosphate kinase B 9 2
IPI00299571 PDIA6 isoform 2 of protein disulfide-isomerase A6 9 2
IPI00332828 CES2 carboxylesterase 2 isoform 1 9 2
IPI00377025 PRH1; PRH2 PRH1 protein (fragment) 9 1
IPI00220828 TMSB4X thymosin β-4 8 4
IPI00012011 CFL1 cofilin-1 8 3
IPI00827847 BPI bactericidal permeability-increasing protein 8 3
IPI00008529 RPLP2 60S acidic ribosomal protein P2 8 2
IPI00009856 PLUNC protein Plunc 8 2
IPI00024915 PRDX5 isoform mitochondrial of peroxiredoxin-5, mitochondrial 8 2
IPI00304171 H2AFY isoform 2 of core histone macro-H2A.1 8 2
IPI00216308 VDAC1 voltage-dependent anion-selective channel protein 1 8 1
IPI00023011 SMR3B submaxillary gland androgen-regulated protein 3 homolog B 7 4
IPI00027463 S100A6 protein S100-A6 7 3
IPI00216088 CRABP2 cellular retinoic acid-binding protein 2 7 3
IPI00002818 KLK11 isoform 1 of kallikrein-11 7 2
IPI00010270 RAC2 Ras-related C3 botulinum toxin substrate 2 7 2
IPI00017987 SPRR1A cornifin-A 7 2
IPI00465431 LGALS3 galectin-3 7 2
IPI00010214 S100A14 Protein S100-A14 7 1
IPI00019533 CHI3L2 chitinase-3-like protein 2 7 1
IPI00028064 CTSG cathepsin G 7 1
IPI00299078 PRH1; PRH2 salivary acidic proline-rich phosphoprotein 1/2 7 1
IPI00075248 CALM3; CALM1; CALM2 calmodulin 6 3
IPI00456429 UBA52 ubiquitin and ribosomal protein L40 6 3
IPI00017992 SPRR2B small proline-rich protein 2B 6 2
IPI00022810 CTSC dipeptidyl-peptidase 1 6 2
IPI00025366 CS citrate synthase, mitochondrial 6 2
IPI00298237 TPP1 isoform 1 of tripeptidyl-peptidase 1 6 2
IPI00304903 SPRR1B cornifin-B 6 2
IPI00783680 SOD1 superoxide dismutase 6 2
IPI00062120 S100A16 protein S100-A16 6 1
IPI00295542 NUCB1 nucleobindin-1 5 3
IPI00414896 RNASET2 isoform 1 of ribonuclease T2 5 2
IPI00441498 FOLR1 folate receptor alpha 5 2
IPI00013881 HNRPH1 heterogeneous nuclear ribonucleoprotein H 5 1
IPI00478198 PRB1 proline-rich protein BstNI subfamily 1 isoform 1 5 1
IPI00034319 CUTA isoform A of protein CutA 4 3
IPI00003919 QPCT glutaminyl-peptide cyclotransferase 4 2
IPI00011302 CD59 CD59 glycoprotein 4 2
IPI00016513 RAB10 Ras-related protein Rab-10 4 2
IPI00329538 PRSS8 prostasin 4 2
IPI00786921 SPRR1B similar to cornifin B 4 2
IPI00023038 PRB1 basic salivary proline-rich protein 1 4 1
IPI00028066 ADH7 class IV alcohol dehydrogenase 7 mu or sigma subunit 4 1
IPI00029699 RNASE4 ribonuclease 4 4 1
IPI00177543 PAM uncharacterized protein PAM 4 1
IPI00219029 GOT1 aspartate aminotransferase, cytoplasmic 4 1
IPI00301579 NPC2 epididymal secretory protein E1 4 1
IPI00376005 EIF5A isoform 2 of eukaryotic translation initiation factor 5A-1 4 1
IPI00382404 PRB4 PRB4 protein 4 1
IPI00010182 DBI isoform a 1 of acyl-CoA-binding protein 3 3
IPI00012024 HTN1 histatin-1 3 3
IPI00329801 ANXA5 annexin A5 3 3
IPI00215997 CD9 CD9 antigen 3 2
IPI00291488 WFDC2 isoform 1 of WAP four-disulfide core domain protein 2 3 2
IPI00000877 HYOU1 hypoxia upregulated protein 1 3 1
IPI00003881 HNRPF heterogeneous nuclear ribonucleoprotein F 3 1
IPI00012585 HEXB β-hexosaminidase beta chain 3 1
IPI00299086 SDCBP syntenin-1 3 1
IPI00465315 CYCS cytochrome c 3 1
IPI00022990 STATH statherin 2 3
IPI00027019 PRR4; PRH1; PRH2 proline-rich protein 4 2 2
IPI00027851 HEXA β-hexosaminidase alpha chain 2 2
IPI00028714 MGP matrix Gla protein 2 2
IPI00067738 FAM3B isoform B of protein FAM3B 2 2
IPI00293276 MIF macrophage migration inhibitory factor 2 2
IPI00328960 LOC147645 similar to carcinoembryonic antigen-related cell adhesion molecule 1 2 2
IPI00003176 HTRA1 serine protease HTRA1 2 1
IPI00003802 MAN2A1 α-mannosidase 2 2 1
IPI00006713 DNAJC3 isoform 1 of DnaJ homolog subfamily C member 3 2 1
IPI00012540 PROM1 prominin-1 2 1
IPI00018236 GM2A ganglioside GM2 activator 2 1
IPI00018387 FURIN furin 2 1
IPI00168884 ATP6AP2 renin receptor 2 1
IPI00183695 S100A10 protein S100-A10 2 1
IPI00329482 LAMA4 isoform 1 of laminin subunit α-4 2 1
IPI00333140 DNER delta and Notch-like epidermal growth factor-related receptor 2 1

The list contains the proteins that are not found in plasma but found in Whole, Parotid, and SMSL salivas. The numbers for the Num_Pep and Num_Group columns are represented by the data from WS dataset.