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. Author manuscript; available in PMC: 2010 Sep 30.
Published in final edited form as: J Am Chem Soc. 2009 Sep 30;131(38):13709–13721. doi: 10.1021/ja9039373

Table 3.

Cross-validation using ten compounds from Genentech. All units are in kcal/mol.

Compound # RT*ln(Ki), kcal/mol ΔG predicton Error ΔG + δΔGre prediction Error
32 −8.34 −20.84 −9.12 −0.78 −19.14 −9.44 −1.10
33 −7.68 −22.31 −10.3 −2.62 −17.40 −8.20 −0.52
34 −8.96 −16.97 −6.01 2.95 −18.29 −8.83 0.13
35 −7.54 −23.05 −10.89 −3.35 −14.08 −5.84 1.70
36 −8.52 −20.24 −8.64 −0.12 −15.21 −6.64 1.88
37 −9.35 −24.5 −12.06 −2.71 −17.22 −8.07 1.28
38 −9.49 −28.16 −14.99 −5.50 −21.13 −10.85 −1.36
39 −8.08 −25.44 −12.81 −4.73 −17.80 −8.48 −0.40
40 −9.11 −26.28 −13.49 −4.38 −20.32 −10.27 −1.16
41 −9.17 −27.75 −14.67 −5.5 −20.92 −10.7 −1.53

Average unsigned error (kcal/mol) 3.26 1.11