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. 2009 Oct 21;106(44):18792–18797. doi: 10.1073/pnas.0900589106

Table 1.

Conditions affecting esx-3 transcription

Treatment* Transcription change direction Nominal P value False discovery rate q value
111895 Up 0 0.00
Dipyridyl Up 0 0.00
Deferoxamine Up 0 0.04
Clofazimine Up 0 0.04
Ascididemin Up 0 0.03

Gene set enrichment analysis was performed as described in ref. 26. Expression changes with a nominal P value <0.05 and a false discovery rate q value <0.05 were considered significant.

*Treatments from ref. 27: 111895, dipyridyl, deferoxamine, and ascididemin are known chelators. Clofazimine is an antituberculosis drug with an unknown mechanism of action.

False discovery rate q value is the fraction of observations expected to be false positives.