Table 1.
ConSeq | Sequence conservation | http://conseq.tau.ac.il/ |
PolyPhen | Deleterious effects | http://coot.embl.de/PolyPhen/ |
SIFT | Deleterious effects | http://sift.jcvi.org/ |
OMIM | Database of human genetic disorders | http://www.ncbi.nlm.nih.gov/omim/ |
dbSNP | Identified SNPs | http://www.ncbi.nlm.nih.gov/sites/entrez?db=snp |
GeneTests | Laboratories performing genetic testing | http://www.ncbi.nlm.nih.gov/sites/GeneTests/ |
IL2RGbase | Published mutations in IL2RG | http://research.nhgri.nih.gov/scid/ |
ALPSbase | Published mutations in Fas | http://research.nhgri.nih.gov/alps/ |
STAT3base | Published mutations in STAT3 | http://www3.niaid.nih.gov/labs/aboutlabs/lcid/stat3base/default.htm |
IDbases | Databases for immunodeficiency-causing mutations | http://bioinf.uta.fi/base_root/ |
RESCUE-ESE | Exonic splicing enhancer predictor | http://genes.mit.edu/burgelab/rescue-ese/ |
ESE-Finder | Exonic splicing enhancer predictor | http://rulai.cshl.edu/tools/ESE2/index.html |
dbSNP, single nucleotide polymorphism database; ESE, exonic splicing enhancer; IL2RG, IL-2 receptor, gamma; OMIM, Online Mendelian Inheritance in Man; SNP, single nucleotide polymorphism; STAT3, signal transducer and activator of transcription 3.