Table. 1.
| Strain | Genotype | Reference |
|---|---|---|
| MG1655 | F-wild type | E. coli Genetic Stock Center |
| LC106 | ΔahpF::kan Δ(katG17::Tn10)1 Δ(katE12::Tn10)1 | Seaver and Imlay (2004) |
| CAG18467 | zff-1 ::Tn10 | E. coli Genetic Stock Center |
| MM2115 | mntH9::kan | Kehres and Maguire (2000) |
| SMV41 | mntH9::kan~zff-1::Tn10 | P1(CAG18467) × MM2115 |
| SMV42 | As LC106 plus mntH9::kan~zff-1::Tn10 | P1(SMV41) × LC106 |
| BW25113 | lacI rrnB ΔlacZ hsdK ΔaraBAD ΔrhaBAD | Datsenko and Wanner (2000) |
| AA19 | BW 25113 ΔmntH2::cat | This work |
| AA99 | MG1655 ΔmntH2::cat | P1(AA19) × MG1655 |
| AA30 | LC106 ΔmntH2::cat | P1(AA19) ×LC106 |
| JS141 | CSH7 ΔahpCF1::cat Δ(katG17::Tn10)1 ΔkatE1::kan | Laboratory Stock |
| AA118 | JS141 mntH9::kan~zff-1::Tn10 | P1(SMV41) × JS141 |
| JS148 | AB1157 ΔahpCF1::cat Δ(katG17::Tn10)1 ΔkatE1::kan | Laboratory Stock |
| AA120 | JS148 mntH9::kan~zff-1::Tn10 | P1(SMV41) × JS148 |
| JI370 | MG1655 ΔahpF::kan | Seaver and Imlay (2001) |
| AA116 | JI370 ΔmntH2::cat | P1(AA19) × JI370 |
| JI364 | Δ(katG17::Tn10)1 | Seaver and Imlay (2001) |
| AA142 | JI364 ΔmntH2::cat | P1(AA19) × JI364 |
| DH5a pir+ |
supE44 ΔlacU169 (φ80lacZδM15) hsdR17 recA1 endA1 gyrA96
thi-1 relA1 pir+ |
Jim Slauch |
| SJ99 | MG1655 Δ(lacZ1::cat)1 | Laboratory Stock |
| G169 | F-, aroD shiA proA argE zdg-299::Tn10 | Grogan and Cronan (1984) |
| JI132 | AB1157 (sodA::Mud PR13)25 (sodB::kan)1-Δ2 | Linn and Imlay (1987) |
| KK183 | JI132 zdg-299::Tn10 | P1(G169) × JI132 |
| SMV29 | LC106 (sodB::kan)1-Δ2 | Varghese and Imlay (2007) |
| SMV32 | MG1655(sodB::kan)1-Δ2 | Varghese and Imlay (2007) |
| AA130 | MG 1655 Δ(lacZ1::cat)1 attλ::[pSJ501::sodA’-lacZ+] | This work |
| AA138 | SMV32 Δ(lacZ1::cat)1 attλ::[pSJ501::sodA’-lacZ+] | P1(AA130) × AA136 |
| AA114 | SMV32 ΔmntH2::cat | P1(AA19) × SMV32 |
| AA141 | AA114 Δ(lacZ1::cat)1 attλ::[pSJ501::sodA’-lacZ+] | P1(AA130) × AA137 |
| KCI420 | MG1655 (sodA::Mud PR13)25 | Laboratory Stock |
| AA171 | MG1655 Δ(lacZ1::cat)1 attλ::[pSJ501::mntH’-lacZ+] | This work |
| AA183 | MG1655 Δ(lacZ1::cat)1 attλ::[pSJ501::mntH’-lacZ+] | P1(AA171) × SJ130 |
| SJ108 | LC106 Δ(lacZ1::cat)1 | Laboratory Stock |
| AA191 | SJ108 attλ::[pSJ501::mntH’-lacZ+] | P1(AA171) × SJ108 |
| AA147 | BW25113 mntH1::cat(NI) | This work |
| AA153 | LC106 mntH1::cat(NI) | P1(AA147) × AA153 |
| SMV42/pAA01 | SMV42 with pAA01 | This work |
| AA145 | SMV29 ΔmntH2::cat | P1(AA19) × SMV29 |
| LC106/pDT1.5 | LC106 with pDT1.5 | This work |
| SMV42/pDT1.5 | SMV42 with pDT1.5 | This work |
| Lem17 | MG1655 recA56 srl300::Tn10 | Laboratory Stock |
| XY27 | MG1655 plus recA938::cat ΔahpF::kan Δ(katG17::Tn10)1 Δ(katE12::Tn10)1 |
Park and Imlay (2005) |
| SP66 | LC106 mhpC281::Tn10 lacY1 dps::cat | Park and Imlay (2005) |
| SMV30 | LC106 (sodA::Mud PR13)25 | P1(KK183) × LC106 |
| JEM78 | BW25113 ΔnrdEF1::cat | Julia Martin |
| JEM90 | LC106 ΔnrdEF1::cat | P1(JEM78) × LC106 |
| AA44 | BW25113 Δicd1::cat | This work |
| AA160 | LC106 Δicd1::cat | P1(AA44) × LC106 |
| AA38 | BW25113 ΔpgmI1::cat | This work |
| AA59 | LC106 ΔpgmI1::cat | P1(AA38) × LC106 |
| AA28 | BW25113 ΔmntR1::cat | This work |
| AA33 | LC106 ΔmntR1::cat | P1(AA28) × LC106 |
| AA79 | BW25113 ΔglpX1::cat | This work |
| AA89 | LC106 ΔglpX1::cat | P1(AA89) × LC106 |
| AA94 | BW25113 ΔmaeA1::cat | This work |
| AA110 | LC106 ΔmaeA1::cat | P1(AA94) × LC106 |
| Plasmid | Genotype | Reference |
|---|---|---|
| pAA01 | pBR322 with mntH | This work |
| pSJ501 | pAH125 derivative with cat flanked by flp sites | Soojin Jang |
| pAA02 | pSJ501::sodA’-lacZ+ | This work |
| pAA03 | pSJ501::mntH’ -lacZ+ | This work |
| pDT1.5 | pBR322 with sodA | Carlioz and Touati (1986) |