Table 1. Markers analyzed in the current study.
|
Gene (chromosome) |
Chromosomal locus |
Variant name |
Marker names in previous report [44] |
| 12 |
12q21.31 |
D12S2076 |
GATA30F04 |
| 12q23.1 |
D12S1051 |
GATA2401 |
|
| 12q23.1 |
D12S2081 |
GATA7A02 |
|
| 12q23.1 |
D12S393 |
GATA15A03 |
|
| 12q23.1 |
D12S1059 |
GATA47G01 |
|
| 12q23.1 |
D12S1041 |
ATA24F01 |
|
| 12q23.2 |
D12S1030 |
GATA6H09 |
|
| 18 |
18p11.32 |
D18S476 |
D18S476 |
| 18p11.32 |
GATA178F11 |
GATA178F11 |
|
| 18p11.31 |
D18S52 |
D18S52 |
|
| 18p11.31 |
GATA185C06 |
GATA185C06 |
|
| 18p11.31 | GATA116D12 | GATA116D12 |
Coverage was intended to be at least 3 markers per gene. Markers on Chromosome 12 and chromosome 18 were previously reported [44]. SNPs were used at other myopia candidate loci for FGF2, PAX6, BDNF, COL2A1, and COL18A1. The PAX6 assays were selected from Hammond et al. [46]. The information presented in the "Chromosomal locus" column was obtained from the UCSC genome site.