Table II.
Proteins with Morphing Regions
Structures |
||||||
---|---|---|---|---|---|---|
Name | Disulfide | ox | re | Morphing region | ΔSG Å | Transition Reduced → Oxidized |
EcOxyR | 199–208 | 1i6a | 1i69 | 281–298 | 15.9 | Helix, coil to sheet |
HsCLIC1 | 24–59 | 1rk4 | 1k0m | 27–56 | 13.5 | Sheet to helix, coil |
VpChpP | 424–493 | 1v7v | 1v7w | 483–499 | 10.8 | Strand to coil |
SaArsC | 82–89 | 1lju | 1jf8 | 81–95 | 10.7 | Helix to coil |
AtCPDase | 104–110 | 1fsi | 1jh6 | 99–119 | 9.0 | C-term of helix to coil |
Aebcp | 49–54 | 2cx3 | 2cx4 | 44–60 | 7.6 | Helix to β-hairpin |
Hs/RnPhe hydroxylase | 203–334 | 1tdw | 1phz | 131–149 | 7.2 | Helix to coil |
HsAKT | 60–77 | 1unr | 1unq | 39–53 | 6.8 | Helix to coil |
SaArsC | 10–82 | 1lk0 | 1jf8 | 80–94 | 5.7 | Helix to coil |
HsSSAT | 120–122 | 2b5g | 2g3t | 145–147,155–170 | 5.2 | Coil to strand transition |
HsIL2 | 58–105 | 1m48 | 1m4a | 29–36, 71–87 | 5.1 | Coil to N-term of helix |
TfIMPDH | 26–459 | 1meh | 1pvn | 317–327,412–435 | 5.0 | Helical phase shift, helix to coil |
RnPR-1 Ppase | 49–104 | 1x24 | 12cl | 20–30,46–56,103–110 | 4.9 | R1 helix to coil, R3 coil to helix |
EcMurD | 208–227 | 1uag | 1eeh | 345–354 | 4.6 | Helix to coil transition |
HepCRNA polymerase 1a | 303–311 | 1nhu | 1c2p | 303–318 | 3.8 | β-hairpin straddled by disulfide (motif C) curls in oxidized structure |
TtLeu-tRNAs | 439–484 | 1obh | 1h3n | 150–193, 436–447, 539–546 | 3.8 | Sheet melts, helical phase shift |
EcATCase | 114–141 | 1tug | 1d09 | 45–58 | 3.7 | Coil to helix transition |
HepCRNA polymerase 2b | 316–366 | 1yvx | 1yuy | 19–38, 445–451, 539–546 | 3.6 | Helix to coil |
HsTSP1 | 153–214 | 2es3 | 1za4 | 17–29 | 3.1 | Coil to helix transition |
MmActivin receptor | 86–91 | 1bte | 2goo | 58–73, 87–94 | 3.0 | R1 helix to coil, R2 coil to helix |
Schem13 | 193–193a | 1txn | 1tkl | 40–60, 187–202 | NA | R1 coil to strand, R2 coil to helix/strand |
HsDNA pol III λ | 543–543a | 1xsl | 1xsn | 460–474 | NA | Strand to coil |
HsActivin | 80–80a | 2arv | 2arp | 20–27, 65–79 | NA | R1 helix to coil transition |
R2 coil to extension of C-term helix | ||||||
HsRXR | 269–269a | 1g5y | 1fm9 | 242–264,433–451 | NA | Coil to helix R2 |
Transitions are expressed from reduced to oxidized but are likely to be reversible. Structures where change in SG separation is caused by quaternary structure changes are indicated as NA.
ox, oxidized structure; re, reduced structure; AKT, Rac-alpha serine/threonine kinase; ArsC, arsenate reductase; ATCase, aspartate carbamoyltransferase; bcp, bacterioferritin comigratory protein; ChpP, chitobiose phosphorylase; CLIC1, chloride intracellular channel protein 1; CPDase, cyclic nucleotide phosphodiesterase; DNA pol III λ, DNA polymerase III λ; hem13, coproporphyrinogen III oxidase; IL2, interleukin 2; IMPDH, inosine monophosphate dehydrogenase; Leu-tRNAs, leucyl-tRNA synthetase; MurD, UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase; OxyR, hydrogen peroxide-inducible genes activator; PR-1 Ppase, protein tyrosine phosphatase 4a1; RXR, retinoic acid receptor; SSAT, spermidine/spermine N1-acetyltransferase; TSP1, thrombospondin-1; Ae, Aeropyrum pernix, At, Arabidopsis thaliana; Ec, E. coli; HepC, Hepatitis C; Hs, Homo sapiens; Mm, Mus musculus; Rn, Rattus norvegus; Sa, Staphylococcus aureus; Sc, Saccharomyces cerevisiae; Tf, Tritrichomonas foetus; Tt, Thermus thermophilus; Vp, Vibrio proteolyticus.
2nd Cys residue is in another chain (interchain disulfide).