Table 3.
SNP analysis of monkey oocyte donors and rPESC lines
SNP | Egg donor 22184 |
rPESC-1 | rPESC-2 | rPESC-3 | Egg donor 16715 |
rPESC-4 | Egg donor 18178 |
rPESC-5 |
---|---|---|---|---|---|---|---|---|
BCHE:76 | C | C | C | C | GCa | G | C | C |
BCHE:447 | AGa | A | G | G | AGa | A | AGa | A |
CCL8:516 | G | G | G | G | AGa | A | AGa | G |
CCR1:641 | G | G | G | G | G | G | G | G |
CCR9:315 | C | C | C | C | C | C | CTa | CTa |
CD40LG:738 | G | G | G | G | G | G | AGa | AGa |
CD44:471 | T | T | T | T | T | T | T | T |
CD69:294 | CTa | CTa | CTa | CTa | CTa | CTa | C | C |
CD74:213 | C | C | C | C | C | C | CTa | CTa |
CD74:344 | CTa | CTa | CTa | CTa | CTa | CTa | C | C |
CFTR:796 | AGa | AGa | G | A | G | G | AGa | AGa |
CX3CR1:593 | AGa | AGa | AGa | AGa | AGa | AGa | G | G |
CXCL12:173 | C | C | C | C | T | T | CTa | C |
CYP11A1:150 | G | G | G | G | AGa | G | AGa | G |
FAS:135 | A | A | A | A | AGa | A | A | A |
FSHR:784 | CGa | CGa | CGa | C | CGa | CGa | C | C |
HTATSF1:636 | C | C | C | C | C | C | CTa | CTa |
IL1:755 | ATa | ATa | ATa | ATa | ATa | ATa | ATa | ATa |
IL2RA:124 | C | C | C | C | CTa | CTa | C | C |
INHBB:131 | C | C | C | C | TCa | TCa | C | C |
ITGA:321 | A | A | A | A | A | A | AGa | AGa |
LRP8:647 | T | T | T | T | C | C | CTa | CTa |
NDN:135 | G | G | G | G | AGa | AGa | G | G |
NOS1:216 | AGa | ND | AGa | AGa | AGa | AGa | ND | ND |
NR3C1:458 | T | T | T | T | T | T | ATa | ATa |
PYY:151 | T | T | T | T | TCa | TCa | T | T |
SIRT1:277 | GTa | GTa | GTa | GTa | G | G | G | G |
SLC5A7:79 | G | G | G | G | G | G | G | G |
SLC6A4:132 | GCa | G | C | C | C | C | GCa | G |
SNCA:394 | TCa | ND | TCa | C | C | C | ND | ND |
STAR:522 | GTa | G | G | GTa | GTa | G | GTa | T |
TLR4:735 | T | T | T | T | TCa | C | T | T |
TLR5:389 | TCa | T | C | C | TCa | T | C | C |
TNF:82 | T | T | T | T | T | T | CTa | CTa |
XCL1:320 | C | C | C | C | T | T | T | T |
Heterozygous loci.
Abbreviations: ND, not determined; rPESC, rhesus parthenogenetic embryonic stem cell; SNP, single-nucleotide polymorphism.