Table 4.
Gene expression changes in RN6390 versus LUG776.
| RN6390 vs LUG776 | |||
|---|---|---|---|
| Gene number (USA300) | Gene product function | up-regulated | down-regulated |
| SAUSA300_0085 | Hypothetical protein | 2.61 | |
| SAUSA300_0113 | Immunoglobulin G binding protein A precursor | 3.66 | |
| SAUSA300_0118 | Cysteine synthase (EC 2.5.1.47) | 2.96 | |
| SAUSA300_0125 | Diaminopimelate decarboxylase (EC 4.1.1.20) | 2.88 | |
| SAUSA300_0409 | Hypothetical exported protein | 2.26 | |
| SAUSA300_0508 | ClpC ATPase | 3.24 | |
| SAUSA300_0509 | Arginine kinase (EC 2.7.3.3) | 3.16 | |
| SAUSA300_0877 | ClpB protein | 5.29 | |
| SAUSA300_1377 | Hypothetical protein | 26.38 | |
| SAUSA300_1378 | Hypothetical cytosolic protein | 22.18 | |
| SAUSA300_1379 | Hypothetical cytosolic protein | 142.65 | |
| SAUSA300_1380 | Hypothetical protein | 159.30 | |
| SAUSA300_1383 | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)* | 6.58 | |
| SAUSA300_1390 | Hypothetical protein* | 16.36 | |
| SAUSA300_1393 | Phage protein* | 11.25 | |
| SAUSA300_1397 | Major tail protein* | 163.08 | |
| SAUSA300_1403 | Portal protein* | 81.55 | |
| SAUSA300_1407 | Transcriptional activator RinA* | 45.76 | |
| SAUSA300_1437 | Hypothetical protein* | 742.69 | |
| SAUSA300_1438 | DNA integration/recombination/inversion protein* | 116.55 | |
| SAUSA300_2366 | Leukocidin S subunit | 3.23 | |
| SAUSA300_2367 | Hypothetical protein | 3.25 | |
| SAUSA300_2493 | Hypothetical protein | 2.45 | |
*
phage ϕSLT region.