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. Author manuscript; available in PMC: 2009 Nov 16.
Published in final edited form as: J Med Entomol. 2009 Jul;46(4):796–809. doi: 10.1603/033.046.0410

Table 3.

Estimates of COI variability and results of neutrality tests in Argentinean, Bolivian, Peruvian, and Uruguayan T. infestans

N S k θw π h Hd DT FS R2
Arg 207 40 3.864 0.0102 0.0059 32 0.812 −1.248 −10.732a 0.048b
Arg (1 per structure) 104 39 3.525 0.0113 0.0053 31 0.830 −1.640a −16.741c 0.044a
Arg (1 per locality) 39 19 3.714 0.0068 0.0056 15 0.780 −0.573 −3.784b 0.092
SE 52 23 2.748 0.0077 0.0042 12 0.805 −1.482a −1.980 0.060b
LR 22 16 2.563 0.0067 0.0039 8 0.771 −1.512a −1.121 0.115
SJ 15 9 4.400 0.0042 0.0067 3 0.676 2.211a 5.847 0.244
SF 15 9 2.152 0.0042 0.0033 8 0.838 −0.834 −2.811 0.103
RN 15 8 3.352 0.0037 0.0051 2 0.419 1.335 7.074 0.210
SL 8 6 2.571 0.0035 0.0039 2 0.429 0.518 4.286 0.214
CO 14 7 2.201 0.0033 0.0056 2 0.527 2.500c 7.349 0.264
CA 15 3 1.067 0.0014 0.0016 4 0.533 0.464 1.069 0.178
FO 17 3 0.353 0.0013 0.0005 3 0.228 −1.706b −0.963 0.171
SA 15 2 0.686 0.0009 0.0014 3 0.600 0.302 0.160 0.171
TU 19 2 0.526 0.0004 0.0008 2 0.526 1.547 1.452 0.263
Bol (dom) 14 3 1.242 0.0014 0.0019 4 0.780 0.968 0.057 0.168
Bol (syl) 10 2 0.667 0.0011 0.0010 3 0.511 −0.184 −0.272 0.190
Uru 5 1 0.400 0.0007 0.0006 2 0.400 −0.817 0.090 0.400
Per 7 0 0.000 0.0000 0.0000 1 0.000
a

P < 0.05

b

0.09 < P; and

c

P < 0.01.

N, no. of sequences; S, no. of segregating sites; k, mean no. of pairwise differences per sequence; θw, Watterson’s estimator; π, Tajima’s estimator; h, no. of haplotypes; Hd, haplotype diversity; DT, Tajima’s test; FS, Fu’s test; R2, Ramos-Onsins and Rozas’ test.