Skip to main content
. 2009 Oct 8;104(7):1363–1372. doi: 10.1093/aob/mcp254

Table 1.

Experimental conditions of PCR: specific primers, annealing temperature (T), total number of amplification cycles (N) used for semi-quantitative PCR analysis of gene expression and corresponding size of the amplified fragments (S)

Gene (accession number) Primer sequence (5′ → 3′)
T (°C) N S (bp)
LuEF1α Sense TTGGATACAACCCCGACAAAA 60 31 100
Anti-sense GGGCCCTTGTACCAGTCAAG
Lupmet Sense GGRCCATCRAARCACCARGC 55 30 158
Anti-sense AAGATGARGTCGACKGTSCC
Lupme1 (AF355056) Sense CATCAACCCCAACTTCCTCCTC 55 35 223
Anti-sense CCCACCACCGCAGTTTTAATATC
Lupme3 (AF188895) Sense ACCGGTCCATGTATCGC 55 32 178
Anti-sense TGACGTGCTCATTGTCTC
Lupme5 (AF355057) Sense CGCCGCCGTTTTATCC 53 35 176
Anti-sense CGCACAGCTCGATGCA
Flxper1 (L07554) Sense TACTTCACCAATCTCCAGACC 58 29 101
Anti-sense GCGAACCTGTTGACGAGCTC
Flxper2 (L24120) Sense CCACTCCGACCAAGTCCTGTT 58 32 133
Anti-sense CAGTGAGGGGCTTGATGTCT
Flxper3 (U59284) Sense CGACAACAAGTATTATGTTGACTTG 60 30 185
Anti-sense ACCGGTCAACACGCTTATCTGC
Flxper4 (AF049881) Sense TACCAGGATCTGGTGGCGAG 58 35 98
Anti-sense TTGTTGCTGTAAGTCCTCACC

A theoretical total Lupmet was obtained using degenerate primers designated as the most common sequences within the three Lupme genes.