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. 2007 May 23;14(2):79–89. doi: 10.1093/dnares/dsm007

Table 1.

BLAST results on mouse genome

No significant alignments on mouse genome 262 None
Significant alignments with mitochondrial genes 104 Mitochondrial genes
Multiple high-scoring alignments on mouse genome 19 Multiple hits
Significant alignments on mouse genome 1050 Genes (940)
Annotated genes (793)
Hypothetical genes (147)
ESTs (47)
Genomic sequences (63)

cDNA sequences are separated into four different categories based on the types of alignments generated. Alignments on the mouse genome were subdivided into Genes, ESTs, and genomic sequences. For the category ‘Genes’, we differentiated further between ‘annotated’ and ‘hypothetical’ depending on the gene RefSeq status recorded at NCBI.72