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. 2009 Dec 7;4(12):e8203. doi: 10.1371/journal.pone.0008203

Table 3. Bacterial strains, plasmids and oligonucleotides used in this study.

Strains, vectors and primers Descriptiona Source or Reference
Strains
P. aeruginosa
MPA mutS::ISlacZA/hah-TcR, MPAO1 derivative [53]
MPA-T1 TcR, MPA carrying a mucAT1 allele This study
MPA-T2 TcR, MPA carrying a mucAT2 allele This study
MPA-T3 TcR, MPA carrying a mucAT3 allele This study
E. coli
XL1-Blue host strain for DNA manipulation [60]
SY327 λpir RfR; recipient to propagate pKNG-101 derivatives [61]
SM10 λpir Recipient for conjugal transfer of pKNG-101 derivatives [61]
Vectors
pGEM-T Easy ApR; PCR product cloning vector Promega
pGEM-mucAT1 ApR; P. aeruginosa mucAT1 cloned in pGEM-T Easy This study
pGEM-mucAT2 ApR; P. aeruginosa mucAT2 cloned in pGEM-T Easy This study
pGEM-mucAT3 ApR; P. aeruginosa mucAT3 cloned in pGEM-T Easy This study
pKNG101 SmR, suicide delivery plasmid containing sacB gene (SucS) [55]
pKNG-mucAT1 SmR, SucS, pKNG101 carrying mucAT1 This study
pKNG-mucAT2 SmR, SucS, pKNG101 carrying mucAT2 This study
pKNG-mucAT3 SmR, SucS, pKNG101 carrying mucAT3 This study
Primers
MucPA-F 5′-GAAGCCTGACACAGCGGCAAATGC-3′ [21]
MucPA-R 5′-CCTCAGCGGTTTTCCAGGCTGGCTGC-3′ [21]
MucBamHI-F 5′-TATGGATCCTGAAGCAATCGACAAAGCTC-3′ This study
MucXbaI-R 5′-TTATCTAGAAGCTGGGAGGGATCGAACTT-3′ This study
MucT1-F 5′-GCGAAGAGCAAGGTGCGCCGCAGG-3′ This study
MucT1-R 5′-CCTGCGGCGCACCTTGCTCTTCGC-3′ This study
MucT2-F 5′-GCAAGGTGCCCCCCAGGTGATCACCAACTCCTC-3′ This study
MucT2-R 5′-CTGGGGGGCACCTTGCTCTTCGCTGTAGCCGG-3′ This study
MucT3-F 5′-AGCAGGGGGCCCCCCAGGTGATCA-3′ This study
MucT3-R 5′-TGATCACCTGGGGGGCCCCCTGCT-3′ This study
a

Resistance markers: Tc, tetracycline; Rf, rifampin; Sm, streptomycin; Ap, ampicillin; Suc, sucrose.