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. Author manuscript; available in PMC: 2010 Apr 28.
Published in final edited form as: Biochemistry. 2009 Apr 28;48(16):3645–3657. doi: 10.1021/bi8018674

Table 4.

Ligand binding by recombinant SBPs determined using fluorescence emission quenching of proteins upon binding of the apo- and ferric form of ligands and molecular weights of SBPs and complexes of proteins with the siderophores determined by ESI-MS.

Protein Liganda Expected ligand charge at pH 7 Kd (nM)b Molecular weight (Da)
Calculatedc Measuredd
FeuA (Bc_3738) 37094.6 37093
BB [BB]0 59 (11) 37976.6 37976
FeBB [FeIII(BB)]3- 19 (1) 38029.6 38029
Ent [Ent] 0 36 (3) 37763.6 37763
FeEnt [FeIII(Ent)]3- 12 (3) 37816.6 37817

FatB (Bc_5106) 37675.4 37675
PB [PB]0 77 (9) 38393.4 NDf
FePB [FeIII(PB)]3- 127 (1) 38446.4 38445
FePBν [FeIII(PBν)]2- 135 (47) 30401.4 38400
3,4-DHB [3,4-DHB]1- 191 (69) 37829.4 ND
Fe(3,4-DHB) [FeIII(3,4-DHB)]0 nde 37884.4 37884
Fe(3,4-DHB)2 [FeIII(3,4-DHB)2]3- 1.2 (0.7) 38037.4 38038

FpuA (Bc_4528) 37166.3 37165
PB [PB]0 23 (8) 37885.3 ND
FePB [FeIII(PB)]3- 175 (35) 37937.3 37937
FePBν [FeIII(PBν)]2- 699 (169) 37891.3 37889
3,4-DHB [3,4-DHB]0 nd 37320.3 ND
Fe(3,4-DHB) [FeIII(3,4-DHB)]1- nd 37375.3 37374

YfiY (Bc_0616) 37118.3 37116
Sch [Sch]0 495 (33) 37537.3 37535
FeSch [FeIII(Sch)]0 34 (3) 37590.3 37589
FeSchν [FeIII(Schν)]1+ 298 (114) 37545.3 ND

YxeB (Bc_0383) 36093.8 36094
DFO [DFO]1+ nd 36654.1 ND
FeDFO [FeDFO]1+ 18 (4) 36706.8 36707
Fch [Fch]0 nd 36781.1 ND
FeFch [FeFch]0 30 (1) 36833.8 36833
a

bacillibactin (BB), enterobactin (Ent), petrobactin (PB), petrobactin photoproduct (PBν), 3,4-dihydroxybenzoic acid (3,4-DHB), schizokinen and its photoproduct (Sch and Schν, respectively), desferrioxamine (DFO), and ferrichrome (Fch)

b

The dissociation constants (Kd) were determined from fluorescence data and are the mean of at least three independent measurements with SD given in parenthesis,

c

Calculated masses of noncovalent complexes were computed using masses of neutral ligand species,

d

Mass measured ± 1 Da,

e

nd – not determined,

f

ND – not detected.