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. 2009 Nov 16;9:71. doi: 10.1186/1472-6807-9-71

Table 4.

Statistical analysis of positives by scoring functions in MOULDER set.

True Positives False Positives
Combination of scores #decoys Combination of scores #decoys

Prosa2003 34 DFIRE; DOPE 126
Inline graphic; ZEmin; DFIRE; GA341; DOPE 23 Prosa2003; DFIRE; DOPE 81
Prosa2003; Inline graphic; DFIRE; DOPE; 19 Prosa2003 72
Prosa2003; Inline graphic; ZEmin; DFIRE; GA341; DOPE 14 ZEmin 48
Prosa2003; DFIRE; DOPE 12 Prosa2003; Inline graphic; DFIRE; GA341; DOPE 35
Prosa2003; DFIRE 10 Inline graphic; ZEmin; DFIRE; GA341; DOPE 34
ZEmin 9 DFIRE 33
Prosa2003; Inline graphic 8 Inline graphic; DFIRE; DOPE 31
DFIRE; DOPE 3 DOPE 31
Prosa2003; ZEmin 2 Inline graphic 24
Inline graphic; ZEmin; DFIRE; DOPE 2 Inline graphic; DFIRE; GA341; DOPE 18
Prosa2003; ZEmin; DFIRE; GA341; DOPE 2 ZEmin; DFIRE; DOPE 17
ZEmin; GA341 2 Prosa2003; Inline graphic; DFIRE; DOPE 16
Prosa2003; ZEmin; GA341 1 Inline graphic; ZEmin; DFIRE; DOPE 15
ZEmin; DFIRE; DOPE 1 GA341 13
Inline graphic 1 Prosa2003; DFIRE; GA341; DOPE 13
Inline graphic; DFIRE; GA341; DOPE 1 Inline graphic; ZEmin 10
Inline graphic; ZEmin; GA341 1 ZEmin; DFIRE 7
Prosa2003; Inline graphic; DOPE 1 Prosa2003; Inline graphic 6
ZEmin; DFIRE; GA341; DOPE 1 DFIRE; GA341; DOPE 5
GA341 1 Prosa2003; Inline graphic; GA341 3
Prosa2003; Inline graphic; ZEmin; DFIRE; DOPE 1 Inline graphic; ZEmin; DFIRE 3
Inline graphic; DFIRE; DOPE 1 Prosa2003; Inline graphic; ZEmin; DFIRE; GA341; DOPE 3
Prosa2003; DOPE 3
ZEmin; DOPE 3
Prosa2003; DFIRE; 3
Inline graphic; ZEmin; DFIRE; GA341 3
Inline graphic; DOPE 3
ZEmin; GA341 3
Inline graphic; GA341 1
Inline graphic; DFIRE 1
Inline graphic; ZEmin; GA341 1

Distribution of true-positives and false-positives among decoys of MOULDER according to one or more scoring functions and their thresholds. Columns show the number of decoys (#decoys) found by one or more scoring functions (combination of scores).