Table 7.
Important miRNA-processing genes in the CNV regions
| Gene | Entrez ID | Gene location (hg18) | CNV ID | CNV position (hg18) | Observed CNVsa |
|---|---|---|---|---|---|
| SNIP1 | 79753 | chr1:37774729-37792490(−) | Variation_0006 | chr1:37714745-37826968 | 1 loss |
| RNASEN | 29102 | chr5:31436358-31568039(−) | Variation_3550 | chr5:31332034-31505885 | N.A. |
| RNASEN | 29102 | chr5:31436358-31568039(−) | Variation_47879 | chr5:31412880-31908908 | 3 losses |
| XPO5 | 57510 | chr6:43598050-43651642(−) | Variation_9530 | chr6:43583452-43604640 | 1 gain |
| PIWIL1 | 9271 | chr12:129388567-129422826(+) | Variation_3000 | chr12:128577929-129659406 | 1 gain |
| PIWIL1 | 9271 | chr12:129388567-129422826(+) | Variation_3901 | chr12:128512417-129681529 | N.A. |
| PIWIL1 | 9271 | chr12:129388567-129422826(+) | Variation_8740 | chr12:128578742-129654380 | 1 gain |
| PIWIL1 | 9271 | chr12:129388567-129422826(+) | Variation_35062 | chr12:129417091-129445428 | 1 gain |
| DICER1 | 23405 | chr14:94622319-94693512(−) | Variation_5766 | chr14:94638002-94644051 | 1 loss |
| GEMIN4 | 50628 | chr17:594411-602251(−) | Variation_3136 | chr17:595817-897708 | 2 gains |
| GEMIN4 | 50628 | chr17:594411-602251(−) | Variation_4021 | chr17:568336-1008155 | N.A. |
| GEMIN4 | 50628 | chr17:594411-602251(−) | Variation_5332 | chr17:60543-963131 | 1 gain |
| DGCR8 | 54487 | chr22:18447834-18479400(+) | Variation_4117 | chr22:18406493-18689447 | N.A. |
| DGCR8 | 54487 | chr22:18447834-18479400(+) | Variation_5168 | chr22:18267966-18449970 | 6 losses |
| DGCR8 | 54487 | chr22:18447834-18479400(+) | Variation_31071 | chr22:17399088-19383198 | 6 gains |
a
N.A. stands for not available.