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. Author manuscript; available in PMC: 2010 Sep 1.
Published in final edited form as: Biochim Biophys Acta. 2009 Jul 23;1789(9-10):518–528. doi: 10.1016/j.bbagrm.2009.07.004

Table 1. Examples of viral IRES elements.

Virus Family Virus Known ITAFs

DNA viruses
Herpesvirus Kaposi-sarcoma-associated herpesvirus (KSHV)
Polyomavirus Simian vacuolating virus 40 (SV40)
Nimavirus White spot syndrome virus (WSSV)
RNA viruses
Picornaviruses Poliovirus (PV) PTB, PCBP2, PCBP1, La, unr
SRp20
Coxsackievirus B3 (CVB3) PCBP2, La
Enterovirus 71 (EV71)
Hepatitis A virus (HAV) PTB, PCBP2
Human rhinovirus (HRV) PTB, PCBP2, La, unr
hnRNP A1
Foot-and-mouth disease virus (FMDV) PTB, ITAF45, La
Encephalomyocarditis cirus (EMCV) PTB, La
Theiler’s murine encephalomyelitis virus (TMEV) PTB
Porcine teschovirus serotype 1 (PTV-1)
Potyviruses Cowpea mosaic virus (CPMV)
Tobacco etch virus (TEV)
Flaviviruses Hepatitis C virus (HCV) PTB, PCBP2, La, hnRNP D, hnRNP L
Bovine viral diarrhea virus (BVDV)
Classical swine fever virus (CSFV)
Dicistroviruses Cricket paralysis virus (CrPV)
Drosophila C virus (DCV)
Plautia stali intestine virus (PSIV)
Retroviruses Human T-call lymphotropic virus 1 (HTLV-1) PTB, La
Moloney murine leukenia virus (MoMuLV)
Rous sarcoma virus (RSV)
Simian immunodeficiency virus (SIV)
Human immunodeficiency virus type 1 (HIV) La

Some of the IRES elements identified in viral RNAs are shown, separated into DNA and RNA viruses, and including the virus family. Also shown are the known cellular IRES trans-acting factors (ITAFs) that function in translation for each particular viral IRES. Note that only non-canonical ITAFs are listed; this list does not include any canonical eukaryotic translation initiation factors (eIFs). Data compiled from [82,112,131,132].