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. Author manuscript; available in PMC: 2010 Nov 1.
Published in final edited form as: J Proteome Res. 2009 Nov;8(11):5153–5164. doi: 10.1021/pr900518v

Table 4.

Relative quantitation of biomarker candidates in Apcmin (Min) and normal mouse serum using SILAP standard LC-MRM/MS. Mean ratio for each protein and ratios for each of two replicates are presented.

Proteins Normal Sera Min Sera Min/Normal
Ratio
Normal Sera I Normal Sera II Min Sera I Min Sera II


Mean Ratio Mean Ratio Light Heavy Ratio Light Heavy Ratio Light Heavy Ratio Light Heavy Ratio

Cystatin C 0.002 0.025 9.829 187 46933 0.004 60 59679 0.001 981 40571 0.024 628 25256 0.025
Secreted Phosprotein 1 0.002 0.003 1.316 245 71620 0.003 266 207778 0.001 186 87598 0.002 1108 272677 0.004
Profilin 1 0.305 0.155 0.508 1385 4146 0.334 1598 5786 0.276 1351 11588 0.117 939 4854 0.193
Heat shock protein 8 0.147 0.086 0.583 531 3473 0.153 657 4629 0.142 457 6383 0.072 1231 12278 0.100
Pyruvate Kinase 3 0.000 0.059 0.06/0 0 5369 0.000 0 5453 0.000 230 4141 0.056 164 2591 0.063
Procollagen C-
proteinase enhancer
0.002 0.003 1.367 0 11561 0.000 83 20573 0.004 64 12296 0.005 14 45111 0.000
Nucleobindin 1 0.005 0.022 4.412 0 2360 0.000 65 6512 0.010 212 8306 0.026 312 16851 0.019
HSP 1, alpha 0.000 0.151 0.15/0 0 2028 0.000 0 1484 0.000 592 4476 0.132 576 3400 0.169
Lectin 3 0.015 0.018 1.232 359 28188 0.013 269 15687 0.017 229 17542 0.013 342 14388 0.024
Nucleolin 0.000 0.008 0.01/0 3051 0.000 0 2888 0.000 116 13736 0.008 94 12026 0.008
Fibronectin 1 1.191 12.227 10.267 1421 921 1.543 828 987 0.839 8415 754 11.160 5836 439 13.294