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. Author manuscript; available in PMC: 2010 Dec 14.
Published in final edited form as: Gene. 2009 Jun 6;448(2):233–241. doi: 10.1016/j.gene.2009.05.014

Figure 3. Alignment of IP loci to their respective consensus sequences.

Figure 3

(a) AIP fragments juxtaposed with a representation of a full-length Alu element consensus sequence. The Alu fragments are pink and the consensus sequence is light blue. Two AIP loci are 5′ intact and overall AIP loci align to the consensus sequence with no bias. (b) L1IP fragments juxtaposed with a representation of a full-length L1 element consensus sequence The L1 fragments are. dark blue and the consensus sequence is green. L1IP loci show an alignment bias for the 3′ end of the consensus sequence.