Table 2.
Summary of tag classification into various categories and comparisons
DETs in various comparisons* | ||||||||
---|---|---|---|---|---|---|---|---|
Category | Number of DETs† | E15.5 R versus C | Adult L versus Ri | E15.5 versus E17.5 | E15.5 versus P1.5 | P1.5 versus Ad | E versus Ad | Total |
Gene | 386 (68.8) | 25 (56.8) | 10 (58.8) | 24 (63.2) | 16 (44.4) | 114 (59.4) | 253 (77.1) | 442 |
EST | 33 (5.9) | 2 (4.5) | 2 (11.8) | 1 (2.6) | 1 (2.8) | 9 (4.7) | 24 (7.3) | 39 |
Multiple matches | 55 (9.8) | 9 (20.5) | 3 (17.6) | 5 (13.2) | 4 (11.1) | 21(10.9) | 23 (7.0) | 65 |
Ambiguous | 44 (7.8) | 4 (9.1) | 2 (11.8) | 6 (15.8) | 4 (11.1) | 14 (7.3) | 20 (6.1) | 50 |
No match | 43 (7.7) | 4 (9.1) | 0 (0) | 2 (5.3) | 11 (30.6) | 34 (17.7) | 8 (2.4) | 59 |
Total | 561 | 44 | 17 | 38 | 36 | 192 | 328 | 655 |
Tag classification into various categories and comparisons was based on the mouse genome assembly released in July 2007. Values in parentheses represent the 'percentage' across a column. *Total number of tags for various comparisons is 655 (rather than 561) due to the same tag being statistically significant in more than one comparison. †Differentially expressed tags. Ad: adult stage; C: caudal region; E: embryonic day/stage; L: adult left hemisphere; P: postnatal days; R: rostral region; Ri: adult right hemisphere.