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. Author manuscript; available in PMC: 2009 Nov 27.
Published in final edited form as: Bioorg Med Chem. 2008 Oct 17;16(24):10345–10355. doi: 10.1016/j.bmc.2008.10.030

Table 3.

Rotatable bonds used in the conformational analysis of crocacin A 8

graphic file with name nihms-160027-t0011.jpg

Dihedral angle (°)a Preferred valuesb Dockedc Jansen et al.d 1sqxe
t1 ±120 107.3
t2 ±120 108.3
t3 180 −143.9
t4 ±90or180 94.5
t5 0 or 180 151.6
t6 180 158.8
t7 180 152.6
t8 180 −171.5
t9 ±120 139.2 −120 −171.9
t10 −60 −70.2 −60 −75.6
t11 180 173.9 180 174
t12 180 −171.6 180 169.1
t13 −90 −112.8 −60 131.2
a

Ester bonds were assumed to be trans.

b

The preferred rotamers for these bonds, as determined by conformational analysis and Cambridge Structural Database23 (CSD) searches.

c

The dihedral angles exhibited in the final binding model of crocacin A.

d

The dihedral angles determined by NMR24.

e

The dihedral angles for the equivalent bonds of stigmatellin 2 in the 1sqx structure.