Table 2.
Summary of best MIRA assembly results for 96 BACs in two sets and four reference BACs included in both sets.
| set | BAC | largest contig bp |
sum of contigs >1 kb bp |
N50 for contigs >1 kb bp |
N80 for contigs >1 kb bp |
N90 for contigs >1 kb bp |
avg cov | 0.5-10 kb | 10-50 kb | 50-100 kb | >100 kb |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | all (48) | 66,682 | 4,972,546 | 59,359 | 34,037 | 21,204 | 22× | 488 | 61 | 34 | 4 |
| 2 | all (48) | 58,210 | 5,134,266 | 38,959 | 27,816 | 20,140 | 27× | 546 | 97 | 24 | 3 |
| both | all (96) | 62,466 | 10,106,812 | 48,945 | 30,926 | 20,671 | 24× | 1.034 | 158 | 58 | 7 |
| 1 | 184G09 | 120,316 | 120,316 | 120,316 | 120,316 | 120,316 | 18× | - | - | - | 1 |
| 1 | 259I16 | 74,161 | 125,700 | 74,161 | 11,492 | 8,588 | 19× | 4 | 2 | 1 | - |
| 1 | 631P08 | 95,649 | 100,966 | 95,649 | 95,649 | 95,649 | 22× | 2 | - | 1 | - |
| 1 | 711N16 | 75,684 | 101,682 | 75,684 | 12,600 | 11,564 | 24× | - | 2 | 1 | - |
| 2 | 184G09 | 91,195 | 121,589 | 91,195 | 28,663 | 28,663 | 25× | 1 | 1 | 1 | - |
| 2 | 259I16 | 44,395 | 131,950 | 10,249 | 7,210 | 5246 | 14× | 9 | 4 | - | - |
| 2 | 631P08 | 52,664 | 102,141 | 26,440 | 18,577 | 18,577 | 24× | 3 | 2 | 1 | - |
| 2 | 711N16 | 28,312 | 115,582 | 15,998 | 15,998 | 11,527 | 31× | 4 | 5 | - | - |