Table 1.
Overview over organisms and number of CEL-files analyzed
| Organism | GEO # | Chiptype (dimension) | # files |
 min
|
|---|---|---|---|---|
| A. Thaliana | GSE4847 | ATH1-121501 (712 × 712) | 18 | 0.0259 |
| GSE7642 | ATH1-121501 (712 × 712) | 12 | 0.0544 | |
| GSE9311 | ATH1-121501 (712 × 712) | 8 | 0.0546 | |
| C. Elegans | GSE6547 | Celegans (712 × 712) | 25 | 0.0361 |
| GSE8159 | Celegans (712 × 712) | 7 | 0.0396 | |
| D. Melanogaster | GSE3990 | Drosophila_2 (732 × 732) | 6 | 0.0620 |
| GSE6558 | DrosGenome1 (640 × 640) | 24 | 0.0605 | |
| D. Rerio | GSE4859 | Zebrafish (712 × 712) | 8 | 0.0357 |
| E. Coli | GSE11779 | E_coli_2 (478 × 478) | 3 | 0.0869 |
| GSE2928 | Ecoli (544 × 544) | 12 | 0.0172 | |
| GSE6195 | E_coli_2 (478 × 478) | 4 | 0.0664 | |
| H. Sapiens | GSE10433 | HG-U133A_2 (732 × 732) | 12 | 0.0757 |
| GSE5054 | HG-U133A (712 × 712) | 20 | 0.0392 | |
| HG-U133A_2 (732 × 732) | ||||
| M. Musculus | GSE7148 | HG-U133A (712 × 712) | 14 | 0.0296 |
| GSE8514 | HG-U133_Plus_2 (1164 × 1164) | 15 | 0.0738 | |
| GSE11897 | MOE430A (712 × 712) | 11 | 0.0640 | |
| MOE430B (712 × 712) | ||||
| Mouse430_2 (1002 × 1002) | ||||
| GSE6210 | Mouse430_2 | 12 | 0.0594 | |
| GSE6297 | Mouse430_2 | 24 | 0.0325 | |
| O. Sativa | GSE15071 | Rice (1164 × 1164) | 20 | 0.1157 |
| R. Norvegicus | GSE4494 | RG_U34A (534 × 534) | 59 | 0.0488 |
| GSE7493 | Rat230_2 (834 × 834) | 9 | 0.0497 | |
| GSE8238 | Rat230_2 (834 × 834) | 4 | 0.0640 | |
| S. Aureus | GSE7944 | S_aureus (602 × 602) | 6 | 0.0746 |
| S. Cerevisiae | GSE6073 | YG_S98 (534 × 534) | 12 | 0.0283 |
| GSE8379 | YG_S98 (534 × 534) | 8 | 0.0180 | |
| X. Laevis | GSE3368 | Xenopus_laevis (712 × 712) | 20 | 0.0514 |