Table 3.

Simulation study: mean counts based on 200 replicates.

Scenario	# gene	coef.	Approach	Pos. 1	Pos. 2	TP 1	TP 2	Overlap
1	20	0.25	Mc.TGD	13	12	10	10	5
			TGDR	15	16	10	10	5
2	20	0.35	Mc.TGD	12	12	10	10	5
			TGDR	14	14	10	10	5
3	500	0.25	Mc.TGD	28	27	9	10	5
			TGDR	35	35	10	9	4
4	500	0.35	Mc.TGD	24	25	10	9	5
			TGDR	34	34	10	9	5
5	1000	0.25	Mc.TGD	31	31	9	9	5
			TGDR	39	38	9	9	4
6	1000	0.35	Mc.TGD	30	30	10	9	5
			TGDR	37	38	10	9	5

Pos. 1 (2): number of genes identified to be associated with cancer 1 (2); TP 1 (2): number of true positives for cancer 1 (2); Overlap: number of genes identified to be associated with both cancers.