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. 2009 Oct 27;28(9):415–427. doi: 10.1007/s10930-009-9209-9

Table 1.

Sequence identity and similarity between KPN00728 and KPN00729 and available templates obtained from BLAST search against PDB

ID Significant hit E-value SI (%)a SS (%)b Organism Protein function Ref
KPN00728 Complex II (Succinate dehydrogenase) from E. coli with Ubiquinone bound: 1NEK chain C 8e-42 90 95 E. coli SDH [43]
Complex II (Succinate dehydrogenase from E. coli with Dinitrophenol-17 inhibitor co-crystallized at the ubiquinone binding site: 1NEN chain C 8e-42 90 95 E. coli SDH [43]
Complex II (Succinate dehydrogenase from E. coli with Atpenin A5 inhibitor co-crystallized at the ubiquinone binding site: 2ACZ Chain C 8e-42 90 95 E. coli SDH [10]
KPN00729 Complex II (Succinate dehydrogenase) from E. coli with Ubiquinone bound: 1NEK chain D 5e-48 90 95 E. coli SDH [43]
Complex II (Succinate dehydrogenase from E. coli with Dinitrophenol-17 inhibitor co-crystallized at the ubiquinone binding site 1NEN chain D 5e-48 90 95 E. coli SDH [43]
Complex II (Succinate dehydrogenase from E. coli with Atpenin A5 inhibitor co-crystallized at the ubiquinone binding site 2ACZ Chain D 5e-48 90 95 E. coli SDH [10]

The significant hits which are in bold for both KPN00728 and KPN00729 were selected as the template or the structure modeling

aSequence identity

bSequence similarity