Table 5.
Comparison of Ramachandran scores for built model and template (1NEK chain C and from E. coli)
Ramachandran plot (%) | Structure | |
---|---|---|
Built model (K. pneumoniae MGH78578) | 1NEK chain C and D (E. coli) | |
Core | 97.7 | 93.9 |
Allowed | 2.3 | 5.6 |
Generous | 0.0 | 0.5 |
Disallowed | 0.0 | 0.0 |
A total of 97.7 and 2.3% residues from the built model fall within the core and allowed regions. Validation of built model using Ramachandran plot had demonstrated better quality as compared to the 1NEK from E. coli