TABLE 3.
Degrees of similarity of PFGE group patterns of resistant E. coli isolated from fecal deposits of steers as affected by duration of environmental exposure
Resistance and exposure interval groupb | Value for antimicrobial treatment groupa |
|||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
A44 |
AS700 |
Control |
||||||||||
No. of isolates | Similarity to “short” group | Within- group similarity | P valuec | No. of isolates | Similarity to “short” group | Within- group similarity | P value | No. of isolates | Similarity to “short” group | Within- group similarity | P value | |
Ampicillin | ||||||||||||
Short | 20 | 87.9 | <0.001 | 20 | 82.5 | <0.001 | 19 | 81.2 | <0.001 | |||
Moderate | 18 | 60.5 | 58.4 | 0.999 | 21 | 70.6 | 59.1 | 0.759 | 22 | 89.9 | 89.1 | <0.001 |
Long | 18 | 82.1 | 74.3 | 0.050 | 15 | 70.2 | 66.1 | 0.994 | 8 | 52.6 | 56.5 | <0.001 |
Tetracycline | ||||||||||||
Short | 29 | 61.1 | 0.979 | 31 | 59.5 | <0.001 | 35 | 66.1 | 0.101 | |||
Moderate | 18 | 54.6 | 57.2 | 0.998 | 17 | 56.3 | 60.8 | 0.19 | 17 | 67.8 | 73.7 | <0.001 |
Long | 32 | 61.0 | 70.4 | <0.001 | 35 | 53.7 | 59.1 | 0.002 | 23 | 63.6 | 61.1 | 0.868 |
Control, no antimicrobial agents added to the diets of steers from which fecal deposits originated; A44, chlortetracycline (44 ppm); AS700, chlortetracycline and sulfamethazine (each at 44 ppm).
Each interval represents the duration of environmental exposure of fecal deposits prior to sampling: short, days 0 and 7; moderate, days 56 and 70; long, days 126 and 175. Ampicillin- or tetracycline-resistant E. coli was isolated from MacConkey agar amended with ampicillin (32 μg ml−1) or tetracycline (16 μg ml−1), respectively. The groups of resistant E. coli were analyzed separately.
The effect of the exposure interval on the significance of within-group similarity (P value) was analyzed within each antimicrobial treatment group. PFGE profiles were grouped by short, moderate, and long exposure intervals and analyzed by bootstrapping (n = 1,000).