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. 2009 Sep 30;47(12):3998–4005. doi: 10.1128/JCM.00809-09

TABLE 2.

Percent nucleotide sequence identitya of the strain DS108 nonstructural gene segments (NSP1 to NSP3 and NSP5) with that of the respective prototype strain of each genotype

NSP1
NSP2
NSP3
NSP5
Genotype Strain % nt sequence homologya Genotype Strain % nt sequence homology Genotype Strain % nt sequence homology Genotype Strain % nt sequence homology
A1 Wa 75.1 N1 Wa 79.3 T1 Wa 77.8 H1 Wa 83.9
A1 KU 74.5 N1 KU 79.3 T1 KU 77.6 H1 KU 84.7
A2 DS1 92.1 N2 DS1 85.2 T2 DS1 94.8 H2 DS1 95.2
A2 DRC86 97.4 N2 DRC86 97.2 T2 DRC86 98.5 H2 DRC86 97.9
A2 DRC88 97.4 N2 DRC88 96.9 T2 DRC88 98.1 H2 DRC88 97.9
A2 RV176-00 98.6 N2 RV176-00 99.7 T2 RV176-00 98.7 H2 RV176-00 98.7
A2 RV161-00 98.6 N2 RV161-00 99.7 T2 RV161-00 98.6 H2 RV161-00 98.8
A3 Au-1 59.2 N3 Au-1 80.9 T3 Au-1 81.0 H3 Au-1 83.7
A4 Po-13 36.6 N4 Po-13 66.0 T4 Po-13 55.5 H4 Po-13 66.2
A5 SA11g4“O” (5N) 46.5 N5 SA11g4“O” (5N) 79.8 T5 SA11g4“O” (5N) 75.5 H5 SA11g4“O” (5N) 84.8
A6 L338 43.9 T6 OVR762 77.2 H6 RRV 84.5
A7 EW 43.4 T7 UK 76.7 H6 T152 84.8
A8 Gottfried 69.8
A9 ALA 46.0
A10 FI14 46.3
A11 OVR762 60.3
A12 T152 53.9
A13 B223 62.1
A14 A5-13 61.8
a

A high degree of nucleotide sequence identity is indicated in boldface.