TABLE 2.
NSP1 |
NSP2 |
NSP3 |
NSP5 |
||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Genotype | Strain | % nt sequence homologya | Genotype | Strain | % nt sequence homology | Genotype | Strain | % nt sequence homology | Genotype | Strain | % nt sequence homology |
A1 | Wa | 75.1 | N1 | Wa | 79.3 | T1 | Wa | 77.8 | H1 | Wa | 83.9 |
A1 | KU | 74.5 | N1 | KU | 79.3 | T1 | KU | 77.6 | H1 | KU | 84.7 |
A2 | DS1 | 92.1 | N2 | DS1 | 85.2 | T2 | DS1 | 94.8 | H2 | DS1 | 95.2 |
A2 | DRC86 | 97.4 | N2 | DRC86 | 97.2 | T2 | DRC86 | 98.5 | H2 | DRC86 | 97.9 |
A2 | DRC88 | 97.4 | N2 | DRC88 | 96.9 | T2 | DRC88 | 98.1 | H2 | DRC88 | 97.9 |
A2 | RV176-00 | 98.6 | N2 | RV176-00 | 99.7 | T2 | RV176-00 | 98.7 | H2 | RV176-00 | 98.7 |
A2 | RV161-00 | 98.6 | N2 | RV161-00 | 99.7 | T2 | RV161-00 | 98.6 | H2 | RV161-00 | 98.8 |
A3 | Au-1 | 59.2 | N3 | Au-1 | 80.9 | T3 | Au-1 | 81.0 | H3 | Au-1 | 83.7 |
A4 | Po-13 | 36.6 | N4 | Po-13 | 66.0 | T4 | Po-13 | 55.5 | H4 | Po-13 | 66.2 |
A5 | SA11g4“O” (5N) | 46.5 | N5 | SA11g4“O” (5N) | 79.8 | T5 | SA11g4“O” (5N) | 75.5 | H5 | SA11g4“O” (5N) | 84.8 |
A6 | L338 | 43.9 | T6 | OVR762 | 77.2 | H6 | RRV | 84.5 | |||
A7 | EW | 43.4 | T7 | UK | 76.7 | H6 | T152 | 84.8 | |||
A8 | Gottfried | 69.8 | |||||||||
A9 | ALA | 46.0 | |||||||||
A10 | FI14 | 46.3 | |||||||||
A11 | OVR762 | 60.3 | |||||||||
A12 | T152 | 53.9 | |||||||||
A13 | B223 | 62.1 | |||||||||
A14 | A5-13 | 61.8 |
A high degree of nucleotide sequence identity is indicated in boldface.