TABLE 1.
FIESC isolates subjected to DNA MLST
| NRRL no. | FIESC MLST (species)a | Equivalent no(s).b | Isolate source | Origin |
|---|---|---|---|---|
| 3020 | 10-a | FRC R-6053, 7.12 MRC | Unknown | Unknown |
| 3214 | 10-a | FRC R-6054, 7.13 MRC | Unknown | Unknown |
| 5537 | 8-a | ATCC 28805 | Fescue hay | Missouri |
| 6548 | 12-a | IMI 112503 | Wheat | Germany |
| 13335 | 21-a | FRC R-2138 | Alfalfa | Australia |
| 13379 | 23-b | FRC R-5198, BBA 62200 | Oryza sativa | India |
| 13402 | 9-b (F. scirpi) | FRC R-6363 | Pine soil | Australia |
| 13459 | (F. concolor)c | CBS 691.87 | Plant debris | South Africa |
| 20423 | 4-a (F. lacertarum) | IMI 300797 | Lizard skin | India |
| 20697 | 14-b (F. equiseti) | CBS 245.61 | Beet | Chile |
| 20722 | 27-a | IMI 190455 | Chrysanthemum sp. | Kenya |
| 22244 | 25-a | H.-K. Chen F64 | Rice | China |
| 25795 | 5-c | CBS 394.93, BBA 64265 | Disphymacrassifolium seed | Germany |
| 26417 | 26-a | CBS 544.96 | Leaf litter | Cuba |
| 26419 | 14-a (F. equiseti) | CBS 307.94, BBA 68556 (neotype) | Soil | Germany |
| 26921 | 12-a | CBS 731.87 | Wheat | Germany |
| 26922 | 9-c (F. scirpi) | CBS 610.95 | Soil | France |
| 28029 | 3-b | CDC B-3335 | Human eye | California |
| 28577 | 28-a | CBS 430.81 | Grave stone | Romania |
| 28714 | 26-b | ATCC 74289 | Acacia sp. branch | Costa Rica |
| 29134 | 9-a (F. scirpi) | CBS 448.84 | Pasture soil | Australia |
| 31011 | 12-a | BBA 69079 | Thuja sp. | Germany |
| 31160 | 15-c | MDA 3 | Human lung | Texas |
| 31167 | 18-a | MDA 10 | Human sputum | Texas |
| 32175 | 15-a | MDA F10 | Human sputum | Texas |
| 32181 | 15-c | MDA F20 | Human blood | Oklahoma |
| 32182 | 15-b | MDA F22 | Human blood | Texas |
| 32522 | 18-b | Loyola W-14182 | Human diabetic cellulitis | Illinois |
| 32864 | 17-a | FRC R-7245 | Human | Texas |
| 32865 | 21-b | FRC R-8480 | Human endocarditis | Brazil |
| 32866 | 23-a | FRC R-8822 | Human cancer patient | Texas |
| 32867 | 23-a | FRC R-8837 | Human | Texas |
| 32868 | 25-c | FRC R-8880 | Human blood | Texas |
| 32869 | 15-c | FRC R-9445 | Human cancer patient | Texas |
| 32871 | 5-a | FRC R-9561 | Human abscess | Texas |
| 32993 | 25-b | UTHSC 00-755 | Human nasal tissue | Texas |
| 32994 | 15-c | UTHSC 00-494 | Human ethmoid sinus | Texas |
| 32995 | 15-c | UTHSC 99-1964 | Human sinus | Texas |
| 32996 | 15-c | UTHSC 99-1741 | Human leg wound | Texas |
| 32997 | 7-a | UTHSC 99-423 | Human toenail | Colorado |
| 34001 | 15-e | UTHSC 95-1945 | Human foot wound | Texas |
| 34002 | 22-a | UTHSC 95-1545 | Human ethmoid sinus | Texas |
| 34003 | 20-a | UTHSC 95-28 | Human sputum | Texas |
| 34004 | 16-a | UTHSC 94-2581 | Human BAL | Texas |
| 34005 | 24-a | UTHSC 94-2471 | Human intravitreal fluid | Minnesota |
| 34006 | 15-a | UTHSC 93-2692 | Human eye | Texas |
| 34007 | 15-a | UTHSC 93-933 | Human sputum | Texas |
| 34008 | 15-d | UTHSC 92-1955 | Human lung | Texas |
| 34010 | 15-c | UTHSC 02-1698 | Human maxillary sinus | Texas |
| 34011 | 15-a | UTHSC 02-2060 | Human sputum | Texas |
| 34032 | 5-a | UTHSC 98-2172 | Human abscess | Texas |
| 34034 | 1-c | UTHSC 94-1167 | Human leg | Arizona |
| 34035 | 5-d | UTHSC 91-569 | Human sinus | Colorado |
| 34037 | 5-b | UTHSC 02-966 | Human abscess | Colorado |
| 34039 | 1-b | UTHSC 96-1394 | Human | Connecticut |
| 34056 | 16-b | Loyola M54234 | Human bronchial wash | Illinois |
| 34059 | 16-c | Loyola S8158 | Human blood | Illinois |
| 34070 | 17-c | Loyola W37591 | Tortoise | Illinois |
| 36123 | 4-b | CBS 102300, BBA 70843 | Unknown | Unknown |
| 36136 | 14-a (F. equiseti) | CBS 107.07, IMI 091982 | Unknown | Unknown |
| 36269 | 12-b | CBS 162.57 | Pinusnigra seedling | Croatia |
| 36318 | 3-a | CBS 185.31 | Unknown | Unknown |
| 36321 | 14-a (F. equiseti) | CBS 185.34 | Soil | Netherlands |
| 36323 | 3-a | CBS 186.31 | Cotton yarn | England |
| 36372 | 11-a | CBS 235.79 | Air | Netherlands Antilles |
| 36392 | 12-c | CBS 259.54 | Seedling | Germany |
| 36401 | 2-a | CBS 264.50 | Cotton | Mozambique |
| 36448 | 2-b | CBS 384.92 | Phaseolus vulgaris seed | Sudan |
| 36466 | 14-a (F. equiseti) | CBS 414.86 | Potato peel | Denmark |
| 36478 | 9-a (F. scirpi) | CBS 447.84 | Pasture soil | Australia |
| 36548 | 17-b | CBS 190.60 | Banana | Congo |
| 36575 | 20-b | CBS 976.97 | Juniperuschinensis leaf | Hawaii |
| 43297 | 24-b | W. Elmer 22 | Spartina rhizomes | Connecticut |
| 43498 | 8-b | CDC 2006743466 | Human eye | Pennsylvania |
| 43619 | 15-a | UTHSC 05-2847 | Human finger | Texas |
| 43622 | 15-c | UTHSC 03-2501 | Human lung | Texas |
| 43623 | 5-e | UTHSC 03-59 | Human maxillary sinus | Colorado |
| 43635 | 13-a | UTHSC 06-638 | Horse | Nebraska |
| 43636 | 14-c (F. equiseti) | UTHSC 06-170 | Dog | Texas |
| 43637 | 1-a | UTHSC 05-1729 | Dog | Pennsylvania |
| 43638 | 6-a | UTHSC R-3500 | Manatee | Florida |
| 43639 | 19-a | UTHSC 04-135 | Manatee | Florida |
| 43640 | 1-a | UTHSC 04-123 | Dog nose | Texas |
| 43694 | 6-a | CDC 2006743607 | Human eye | Texas |
| 43730 | 16-c | CDC 2006743605 | Contact lens | Mississippi |
| 45995 | 5-b | UTHSC 02-966 | Human abscess | Colorado |
| 45996 | 1-a | UTHSC 03-3101 | Human sinus | New York |
| 45997 | 5-f | UTHSC 04-1902 | Human sinus | Colorado |
| 45998 | 6-b | UTHSC 06-2315 | Human toe | Texas |
a
Arabic numerals identify species, and lowercase roman letters identify unique haplotypes within each species.
b
Sequences of F.concolor NRRL 13459 were used to root the phylogeny (Fig. 1).
c
ATCC, American Type Culture Collection, Manassas, VA; BBA, Biologische Bundesanstalt für Land-und Forstwirtschaft, Institute für Mikrobiologie, Berlin, Germany; CBS, CBS-KNAW Fungal Biodiversity Center, Utrecht, The Netherlands; CDC, Centers for Disease Control and Prevention, Atlanta, GA; Loyola, Loyola University, Maywood, IL; IMI, CABI Biosciences, Egham, Surrey, England; MDA, M. D. Anderson Cancer Center, Houston, TX; WE, Wade Elmer, Connecticut Agricultural Experiment Station, New Haven, CT.