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. 2009 Sep 30;83(24):12973–12983. doi: 10.1128/JVI.00950-09

TABLE 3.

Averages of estimated pairwise genetic distances (d) by Kimura's two-parameter method for the different genomic regions in 13 field isolates of ToCV

Isolate RNA1
RNA2
RdRp
Hsp70h
CP
CPm
d SE d SE d SE d SE
AT1/97 0.00358 0.00142 0.00206 0.00116 0.00024 0.00021 0.00070 0.00038
AT3/98 0.00046 0.00031 0.00000 0.00000 0.00000 0.00000 0.00124 0.00046
AT24/99 0.00037 0.00026 0.00106 0.00053 0.00000 0.00000 0.00021 0.00020
AT80/99 0.00803 0.00213 NDb ND ND ND ND ND
AT198/00 0.00251 0.00061 0.00065 0.00036 0.00022 0.00021 0.00070 0.00038
AT230/00 0.00034 0.00032 0.00098 0.00038 0.00131 0.00084 0.00044 0.00030
AT205/00 0.00087 0.00037 0.00070 0.00040 0.00037 0.00025 0.00000 0.00000
AT36/02 0.00056 0.00031 0.00082 0.00039 0.00062 0.00035 0.00023 0.00022
AT45/02 0.00018 0.00018 0.00061 0.00035 0.00138 0.00064 0.00070 0.00040
AT31/03 0.00056 0.00030 0.00128 0.00087 0.00042 0.00030 0.00023 0.00023
AT138/03 0.00020 0.00019 0.00022 0.00022 0.00175 0.00128 0.00110 0.00062
AT204/04 0.00056 0.00031 0.00022 0.00021 0.00047 0.00033 0.00023 0.00023
AT379/04 0.00111 0.00044 0.00082 0.00039 0.00024 0.00022 0.00023 0.00024
Totala 0.00650 0.00143 0.00133 0.00042 0.00206 0.00086 0.00277 0.00118
a

Estimated pairwise genetic distances by Kimura's two-parameter method after all the viral variants from the different isolates within each genomic region were pooled.

b

ND, not determined.