Table 2. Genomic variants detected in eight exomes based on 2 454 GS FLX runs of aligned data.
Individual | 10032 | 10033 | 10034 | 10035 | 10036 | 10037 | 10039 | 10082 | Avg. | Range |
KNOWN VARIANTS | 7962 | 6342 | 6346 | 9480 | 9875 | 7924 | 9398 | 7165 | 8062 | 6342–9875 |
Non-Synonymous | 3467 | 2687 | 2749 | 4059 | 4257 | 3363 | 3952 | 3108 | 3455 | 2687–4257 |
indel | 49 | 38 | 34 | 69 | 73 | 41 | 65 | 56 | 53 | 34–73 |
SNP | 3418 | 2649 | 2715 | 3990 | 4184 | 3322 | 3887 | 3052 | 3402 | 2649–4184 |
Synonymous | 4495 | 3655 | 3597 | 5421 | 5618 | 4561 | 5446 | 4057 | 4606 | 3597–5618 |
indel | 19 | 20 | 19 | 38 | 35 | 29 | 28 | 30 | 27 | 19–38 |
SNP | 4476 | 3635 | 3578 | 5383 | 5583 | 4532 | 5418 | 4027 | 4579 | 3578–5583 |
NOVEL VARIANTS | 607 | 456 | 444 | 844 | 1163 | 610 | 748 | 591 | 683 | 444–1163 |
Non-Synonymous | 344 | 254 | 244 | 486 | 723 | 347 | 402 | 337 | 392 | 244–723 |
indel | 49 | 44 | 31 | 118 | 296 | 48 | 58 | 115 | 95 | 31–296 |
SNP | 295 | 210 | 213 | 368 | 427 | 299 | 344 | 222 | 297 | 210–427 |
Synonymous | 263 | 202 | 200 | 358 | 440 | 263 | 346 | 254 | 291 | 200–440 |
indel | 21 | 16 | 19 | 44 | 76 | 21 | 29 | 31 | 32 | 16–76 |
SNP | 242 | 186 | 181 | 314 | 364 | 242 | 317 | 223 | 259 | 181–364 |
Total | 8569 | 6798 | 6790 | 10324 | 11038 | 8534 | 10146 | 7756 | 8744 | 6790–11038 |