Skip to main content
. 2009 Dec 3;10(Suppl 15):S8. doi: 10.1186/1471-2105-10-S15-S8

Table 1.

A similar peptide example.

Similar Peptide: MYSKILL
Protein Source Localization Sites Native Peptide Sequence Similarity Level Frequency
A Cytoplasm MYKKILY 5 21
B Nuclear MYSSIIL 4 12
C Cytoplasm Extracellular MYSSILY 5 17

Three protein sources with known localization sites contain peptides that are aligned and similar to the peptide MYSKILL in their HSPs. The similarity level indicates the number of amino acid pairs that are interchangeable between the native peptide sequence and the similar peptide sequence. The frequency represents the number of occurrences they are aligned in HSPs.