Table 3.
Prediction performance of KnowPredsite, ngLOC, and Blast-hit
| Overall Accuracy (%) | Methods | Top 1 | Top 2 | Top 3 | Top 4 |
|---|---|---|---|---|---|
| Single-localized | *KnowPredsite | 92.0 | 95.7 | 96.8 | 98.1 |
| #KnowPredsite | 91.7 | 95.4 | 96.6 | 97.9 | |
| ngLOC | 88.8 | 92.2 | 94.5 | 96.3 | |
| Blast-hit | 86.0 | - | - | - | |
| Multi-localized (at least 1 correct) |
*KnowPredsite | 90.8 | 96.4 | 98.2 | 98.9 |
| #KnowPredsite | 90.1 | 96.1 | 98.1 | 98.9 | |
| ngLOC | 81.9 | 92.0 | 96.1 | 97.4 | |
| Blast-hit | 78.8 | - | - | - | |
| Multi-localized (both correct) |
*KnowPredsite | 74.3 | 83.3 | 88.7 | |
| #KnowPredsite | 72.1 | 82.2 | 87.5 | ||
| ngLOC | 59.7 | 73.8 | 83.2 | ||
| Blast-hit | 45.7 | - | - | ||
*KnowPredsite represents the experiment result using leave-one-out cross validation; #KnowPredsite represents the experiment result using 10-fold cross validation.