TABLE 5.
Total energy and amino acid efficiencies for the central residues of the BH3 peptides
Energies and absolute values of amino acid efficiencies are given in kcal·mol−1.
Residue no. | BH3 peptides |
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---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1G5J (Bad 25)a |
2BZW (Bad 27)b |
1PQ1 (Bim 33)b |
1BXL (Bak 16)b |
1ZY3 (Bid 20)b |
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AAb | ΔGAA | Fc | AA | ΔGAA | F | AA | ΔGAA | F | AA | ΔGAA | F | AA | ΔGAA | F | |
8 | Ala | −2.3 | 0.5 | Ala | −2.6 | 0.5 | Glu | 1.6 | 0.2 | Ile | −4.0 | 0.5 | |||
9 | Gln | −0.4 | 0.0 | Gln | −2.5 | 0.3 | Ile | −2.3 | 0.3 | Gly | −1.0 | 0.3 | Lys | −3.5 | 0.4 |
10 | Arg | 1.8 | 0.2 | Arg | −1.0 | 0.1 | Trp | −0.7 | 0.1 | Gln | −0.5 | 0.1 | Asn | 0.3 | 0.0 |
11 | Tyr | −1.6 | 0.1 | Tyr | −3.3 | 0.3 | Ile | −3.2 | 0.4 | Val | −1.1 | 0.2 | Ile | −3.5 | 0.4 |
12 | Gly | −1.8 | 0.5 | Gly | −2.0 | 0.5 | Ala | −2.7 | 0.5 | Gly | 0.0 | 0.0 | Ala | −1.5 | 0.3 |
13 | Arg | −1.3 | 0.1 | Arg | −1.8 | 0.2 | Gln | −0.7 | 0.1 | Arg | 0.8 | 0.1 | Arg | −0.6 | 0.1 |
14 | Glu | 0.1 | 0.0 | Glu | 0.1 | 0.0 | Glu | 0.4 | 0.0 | Gln | −2.0 | 0.2 | His | 0.1 | 0.0 |
15 | Leu | −5.0 | 0.6 | Leu | −4.7 | 0.6 | Leu | −4.3 | 0.5 | Leu | −5.8 | 0.7 | Leu | −3.4 | 0.4 |
16 | Arg | −0.1 | 0.0 | Arg | −3.2 | 0.3 | Arg | −0.6 | 0.1 | Ala | −2.7 | 0.5 | Ala | −2.0 | 0.4 |
17 | Arg | −0.7 | 0.1 | Arg | −0.7 | 0.1 | Arg | −1.0 | 0.0 | Ile | −0.8 | 0.1 | Gln | −0.3 | 0.0 |
18 | Met | −2.8 | 0.4 | Met | −2.6 | 0.3 | Ile | −2.9 | 0.4 | Ile | −5.0 | 0.6 | Val | −1.8 | 0.3 |
19 | Ser | −1.1 | 0.1 | Ser | −0.7 | 0.1 | Gly | −1.9 | 0.5 | Gly | −2.0 | 0.5 | Gly | 0.4 | 0.1 |
20 | Asp | −1.1 | 0.1 | Asp | −5.0 | 0.6 | Asp | −4.8 | 0.5 | Asp | −4.1 | 0.5 | Asp | −6.0 | 0.8 |
21 | Glu | −4.8 | 0.5 | Glu | −1.4 | 0.2 | Glu | −1.9 | 0.2 | Asp | −2.0 | 0.3 | Ser | −0.7 | 0.1 |
22 | Phe | −5.5 | 0.5 | Phe | −5.5 | 0.5 | Phe | −6.2 | 0.6 | Ile | −8.2 | 1.0 | Met | −2.6 | 0.3 |
23 | Val | −2.0 | 0.3 | Val | −1.5 | 0.2 | Asn | −3.4 | 0.5 | Asn | −5.4 | 0.7 | Asp | 1.2 | 0.2 |
24 | Asp | 0.5 | 0.1 | Asp | 0.7 | 0.1 | Ala | 0.0 | 0.0 | Arg | −3.4 | 0.3 | Arg | −2.7 | 0.2 |
25 | Ser | 0.3 | 0.1 | Ser | 0.0 | 0.0 | Tyr | −3.9 | 0.7 | Ser | −4.7 | 0.8 | |||
26 | Phe | −4.7 | 0.4 | Phe | −2.8 | 0.3 | Tyr | −6.3 | 0.5 | Ile | −5.4 | 0.7 |
a BH3 peptide and its amino acid length are shown.
b AA means amino acid.
c This is the absolute value of the amino acid efficiency.