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. Author manuscript; available in PMC: 2009 Dec 4.
Published in final edited form as: J Med Chem. 2008 Jul 17;51(15):4553–4562. doi: 10.1021/jm8001668

Table 2.

Molecular Properties of the 16 Active Compounds, Their Experimental Inhibition of hLig1, and Their Growth Inhibition of Cultured Human Cellsa

Growth_Inh%
(50 μM)
compd Rot Ring MW Ha Hd log P hLig1_Inh%
(100 μΜ)
MCF10A HCT116
1 2 1 174.24 2 1 1.92 60.5 ± 5.0
25 1 2 190.13 2 1 0.24 59.3 ± 7.5
32 6 3 385.38 6 1 2.10 83.4 ± 3.1
64 4 2 288.65 2 0 2.15 60.6 ± 0.54 40
67 6 2 485.11 2 2 4.91 78.3 ± 8.5 70 70
82 4 2 308.66 3 2 4.84 59.8 ± 1.7 70 40
113 8 2 475.38 5 2 1.42 53.4 ± 7.6
123 4 1 228.32 4 0 1.51 66.9 ± 3.5
175 1 2 173.15 2 0 1.12 54.2 ± 16.5
180 2 3 301.21 2 1 2.44 58.3 ± 6.0 70 70
189 2 2 244.28 3 1 1.96 68.8 ± 4.9 70 70
190 2 3 268.23 5 0 1.78 52.5 ± 6.6 70 40
192 2 3 274.28 2 1 1.56 68.2 ± 1.5 70
197 6 2 308.31 0 0 1.87 91.0 ± 6.9
200 2 2 212.2 1 0 3.04 50.7 ± 10.9
202 4 4 390.42 1 0 5.08 95.0 ± 6.0 50
a

Nonboldfaced compounds are those that also inhibit T4 DNA ligase by >50%. compd is the compound label, Rot the number of rotatable bonds, Ring the number of rings, MW the molecular weight, Ha the number of H-bond acceptors, Hd the number of H-bond donors, and log P the octanol/water partition coefficient. DNA joining and cell culture assays were performed as described in Methods. Inhibition of joining and proliferation is expressed as a percentage of values obtained with DMSO alone.

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