Table 2.
Molecular Properties of the 16 Active Compounds, Their Experimental Inhibition of hLig1, and Their Growth Inhibition of Cultured Human Cellsa
Growth_Inh% (50 μM) |
|||||||||
---|---|---|---|---|---|---|---|---|---|
compd | Rot | Ring | MW | Ha | Hd | log P | hLig1_Inh% (100 μΜ) |
MCF10A | HCT116 |
1 | 2 | 1 | 174.24 | 2 | 1 | 1.92 | 60.5 ± 5.0 | ||
25 | 1 | 2 | 190.13 | 2 | 1 | 0.24 | 59.3 ± 7.5 | ||
32 | 6 | 3 | 385.38 | 6 | 1 | 2.10 | 83.4 ± 3.1 | ||
64 | 4 | 2 | 288.65 | 2 | 0 | 2.15 | 60.6 ± 0.54 | 40 | |
67 | 6 | 2 | 485.11 | 2 | 2 | 4.91 | 78.3 ± 8.5 | 70 | 70 |
82 | 4 | 2 | 308.66 | 3 | 2 | 4.84 | 59.8 ± 1.7 | 70 | 40 |
113 | 8 | 2 | 475.38 | 5 | 2 | 1.42 | 53.4 ± 7.6 | ||
123 | 4 | 1 | 228.32 | 4 | 0 | 1.51 | 66.9 ± 3.5 | ||
175 | 1 | 2 | 173.15 | 2 | 0 | 1.12 | 54.2 ± 16.5 | ||
180 | 2 | 3 | 301.21 | 2 | 1 | 2.44 | 58.3 ± 6.0 | 70 | 70 |
189 | 2 | 2 | 244.28 | 3 | 1 | 1.96 | 68.8 ± 4.9 | 70 | 70 |
190 | 2 | 3 | 268.23 | 5 | 0 | 1.78 | 52.5 ± 6.6 | 70 | 40 |
192 | 2 | 3 | 274.28 | 2 | 1 | 1.56 | 68.2 ± 1.5 | 70 | |
197 | 6 | 2 | 308.31 | 0 | 0 | 1.87 | 91.0 ± 6.9 | ||
200 | 2 | 2 | 212.2 | 1 | 0 | 3.04 | 50.7 ± 10.9 | ||
202 | 4 | 4 | 390.42 | 1 | 0 | 5.08 | 95.0 ± 6.0 | 50 |
Nonboldfaced compounds are those that also inhibit T4 DNA ligase by >50%. compd is the compound label, Rot the number of rotatable bonds, Ring the number of rings, MW the molecular weight, Ha the number of H-bond acceptors, Hd the number of H-bond donors, and log P the octanol/water partition coefficient. DNA joining and cell culture assays were performed as described in Methods. Inhibition of joining and proliferation is expressed as a percentage of values obtained with DMSO alone.