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. Author manuscript; available in PMC: 2009 Dec 8.
Published in final edited form as: Chem Rev. 1997 Aug 5;97(5):1473–1488. doi: 10.1021/cr9603791

Table 4.

The Effect of Ligand Structure on the Binding of an RNA Strand (Sequence rCUCCUCCCUCCU) Shown Are Melting Transition Temperatures (Tm (°C)) and Free Energies (−ΔG° (kcal/mol)) at pH 7.0a

complex (ligandtarget)
Tm (°C) b −ΔG°37b
(kcal)
−ΔG°60b
(kcal)
graphic file with name nihms157575t9.jpg 58.9 15.6 8.3
graphic file with name nihms157575t10.jpg 65.5 18.3 10.8
graphic file with name nihms157575t11.jpg 70.5 18.0 12.3
a

Conditions: 100 mM NaCl, 10 mM MgCl2, 10 mM Na•PIPES, pH 7.0, 1.5 µM each DNA strand.

b

Error in Tm values and in free energies are estimated at ±1.0 °C and ±10%, respectively.