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. 2009 Dec 21;4(12):e8365. doi: 10.1371/journal.pone.0008365

Table 2. List of Genetic Information Processing Networks.

VVID Network Name #gen #pro VVID Network Name #gen #pro #met
2.1 Transcription
23020 RNA polymerase 85 32 23022 Basal transcription factors 55 20
2.2 Translation
23010 Ribosome 473 147 20970 Aminoacyl-tRNA biosynthesis 128 22 64
2.3 Folding, Sorting Degr.
23060 Protein export 36 16 24120 Ubiquitin mediated proteolysis 158 65 4
24130 SNARE int. in ves. transport 63 22 24140 Regulation of autophagy 48 15 5
23050 Proteasome 58 48
2.4 Replication and Repair
23030 DNA replication 60 38 23430 Mismatch repair 37 19
23410 Base excision repair 31 21 23440 Homologous recombination 39 19
23420 Nucleotide excision repair 53 36 23450 Non-homologous end-joining 14 8

VVID: VitisNet identification number; #gen: number of genes in network; #pro: number of proteins in network; #met: number of metabolites in network.