Table 2. List of Genetic Information Processing Networks.
VVID | Network Name | #gen | #pro | VVID | Network Name | #gen | #pro | #met |
2.1 | Transcription | |||||||
23020 | RNA polymerase | 85 | 32 | 23022 | Basal transcription factors | 55 | 20 | |
2.2 | Translation | |||||||
23010 | Ribosome | 473 | 147 | 20970 | Aminoacyl-tRNA biosynthesis | 128 | 22 | 64 |
2.3 | Folding, Sorting Degr. | |||||||
23060 | Protein export | 36 | 16 | 24120 | Ubiquitin mediated proteolysis | 158 | 65 | 4 |
24130 | SNARE int. in ves. transport | 63 | 22 | 24140 | Regulation of autophagy | 48 | 15 | 5 |
23050 | Proteasome | 58 | 48 | |||||
2.4 | Replication and Repair | |||||||
23030 | DNA replication | 60 | 38 | 23430 | Mismatch repair | 37 | 19 | |
23410 | Base excision repair | 31 | 21 | 23440 | Homologous recombination | 39 | 19 | |
23420 | Nucleotide excision repair | 53 | 36 | 23450 | Non-homologous end-joining | 14 | 8 |
VVID: VitisNet identification number; #gen: number of genes in network; #pro: number of proteins in network; #met: number of metabolites in network.