Table 4.
The 10 species with the largest number of MDR forms in Uniprot.
Redundancy level | |||||||
---|---|---|---|---|---|---|---|
Organism | Code | Total | 99% | 90% | 60% | 40% | 25% |
Aspergillus niger | ASPNG | 120 | 120 | 120 | 109 | 76 | 32 |
Vitis vinifera | VITVI | 119 | 107 | 95 | 49 | 29 | 20 |
Aspergillus oryzae | ASPOR | 110 | 110 | 110 | 99 | 72 | 34 |
Oryza sativa Japonica Group | ORYSJ | 101 | 96 | 83 | 47 | 24 | 14 |
Pseudomonas aeruginosa | PSEAE | 90 | 44 | 29 | 28 | 23 | 11 |
Aspergillus terreus NIH2624 | ASPTN | 89 | 89 | 89 | 84 | 70 | 33 |
Burkholderia mallei | BURMA | 82 | 30 | 24 | 21 | 16 | 7 |
Phaeosphaeria nodorum | PHANO | 81 | 81 | 81 | 81 | 68 | 34 |
Emericella nidulans | EMENI | 80 | 80 | 80 | 77 | 65 | 31 |
Listeria monocytogenes | LISMO | 78 | 15 | 9 | 8 | 7 | 5 |
The total number and the number at different levels of redundancy reduction are shown. Clearly, there is a drop in number for several organisms already at the 99 and 90% levels, indicating small variations leading to an increase in the number of MDR forms. At the 25% level, indicative of different MDR families, most organisms have around 20 different forms.