Table VI.
Computational Estimates of Latent Amino Acid Side-Chain Hydrophilicity/Hydrophobicity
Credible Region | ||||||
---|---|---|---|---|---|---|
Meana | sddev | var | 2.50% | median | 97.50% | |
Intercept | ||||||
| ||||||
alpha[1] | −1.318 | 0.4187 | 1.74E02 | −2.231 | −1.293 | −0.5699 |
alpha[2] | −1.171 | 0.3878 | 1.61E02 | −1.938 | −1.163 | −0.4337 |
alpha[3] | −1.171 | 0.3766 | 1.57E02 | −1.924 | −1.164 | −0.4622 |
alpha[4] | −1.147 | 0.3681 | 1.49E02 | −1.87 | −1.141 | −0.4346 |
alpha[5] | −1.279 | 0.3745 | 1.57E02 | −2.053 | −1.265 | −0.5887 |
| ||||||
Slope | ||||||
| ||||||
beta[1] | 0.4338 | 0.009797 | 2.10E04 | 0.4148 | 0.4337 | 0.4536 |
beta[2] | 0.3733 | 0.009241 | 2.02E04 | 0.3551 | 0.3733 | 0.3916 |
beta[3] | 0.3416 | 0.008948 | 1.98E04 | 0.3242 | 0.3415 | 0.3594 |
beta[4] | 0.2557 | 0.008646 | 1.94E04 | 0.2386 | 0.2558 | 0.2729 |
beta[5] | 0.2379 | 0.008586 | 2.10E04 | 0.2214 | 0.2378 | 0.2549 |
| ||||||
Hydrophobicity | ||||||
| ||||||
x[1](Trp) | 100 | 0 | 5.00E13 | 100 | 100 | 100 |
x[2](Phe) | 90.17 | 2.185 | 3.23E02 | 86.01 | 90.11 | 94.6 |
x[3](Leu) | 73.84 | 2.046 | 3.01E02 | 69.91 | 73.81 | 77.96 |
x[4] (Ile) | 69.53 | 1.995 | 3.02E02 | 65.67 | 69.52 | 73.55 |
x[5](Met) | 51.64 | 1.891 | 3.10E02 | 47.99 | 51.62 | 55.43 |
x[6] (Tyr) | 47.49 | 1.865 | 3.24E 02 | 43.83 | 47.49 | 51.16 |
x[7] (Val) | 44.6 | 1.854 | 3.26E02 | 40.97 | 44.6 | 48.25 |
x[8](Pro) | 27.54 | 1.812 | 3.53E02 | 24.01 | 27.53 | 31.16 |
x[9](Cys) | 26.84 | 1.806 | 3.68E02 | 23.35 | 26.84 | 30.41 |
x[10](Ala) | 13.26 | 1.837 | 4.18E02 | 9.671 | 13.26 | 16.84 |
x[11](Glu) | 11.12 | 1.849 | 4.36E02 | 7.513 | 11.12 | 14.75 |
x[12](Thr) | 11.64 | 1.845 | 4.39E02 | 7.996 | 11.65 | 15.25 |
x[13](Arg) | 10.24 | 1.851 | 4.38E02 | 6.65 | 10.23 | 13.87 |
x[14](Asp) | 8.146 | 1.853 | 4.40E02 | 4.518 | 8.15 | 11.79 |
x[15](Gln) | 5.996 | 1.834 | 4.40E02 | 2.452 | 5.998 | 9.619 |
x[16](Gly) | 3.798 | 1.599 | 3.70E02 | 1.233 | 3.662 | 7.277 |
x[17] (His) | 4.143 | 1.669 | 3.99E02 | 1.331 | 4.048 | 7.704 |
x[18](Ser) | 3.526 | 1.538 | 3.54E02 | 1.167 | 3.36 | 6.907 |
x[19](Lys) | 2.917 | 1.343 | 2.80E02 | 1.091 | 2.69 | 6.062 |
x[20](Asn) | 1 | 0 | 5.00E13 | 1 | 1 | 1 |
Mean estimates taken as latent coefficients