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. 2009 Nov 17;41(1):50. doi: 10.1186/1297-9686-41-50

Table 1.

P[T(Ml) | Gsl, Gdl, Ppl]: Probabilities of the transmission events, given the marker phenotypes and parental phases, in the case of a biallelic marker (a, b alleles)

P(T(Ml) | Gsl, Gdl, Ppl) for T(Ml) =
Case Inline graphic Inline graphic Inline graphic Inline graphic Ppl 11 12 21 22
1 a b a b (a, a) 1
2 a b a b (b, b) 1
3 a b b a (a, a) 1
4 a b b a (b, b) 1
5 a b a a (a, a) 1/2 1/2
6 a b a a (a, b) or (b, a) 1/2 1/2
7 b a a a (a, a) 1/2 1/2
8 b a a a (a, b) or (b, a) 1/2 1/2
9 a a a b (a, a) 1/2 1/2
10 a a a b (a, b) or (b, a) 1/2 1/2
11 a a b a (a, a) 1/2 1/2
12 a a b a (a, b) or (b, a) 1/2 1/2
13 a a a a (a, a) 1/4 1/4 1/4 1/4
14 a a b b (a, b) 1/4 1/4 1/4 1/4
15 a b a b (a, b) or (b, a) 1/2 1/2
16 a b b a (a, b) or (b, a) 1/2 1/2

Gilk is the allele marker l the parent i is carrying on its kth chromosome ((k = (1, 2)); Ppl is the marker l phenotype of the progeny; T(Ml) = is the transmission event at marker l