Table 4. Significant genotype-expression associations follow network structure.
Ef-induced | Sm-induced | ||||
Upstream Functional Class | Downstream Functional Class | Odds Ratio | P-value | Odds Ratio | P-value |
Signaling | Effectors | 1.939 | 0.0001 | 1.625 | 0.0056 |
Recognition | Effectors | 1.337 | 0.2188 | 1.637 | 0.0631 |
Recognition | Signaling | 1.566 | 0.0258 | 1.706 | 0.0084 |
Odds ratio represents the proportion of significant associations between upstream SNPs and downstream transcription relative to the proportion of significant associations between downstream SNPs and upstream transcription.