Table 4.
Search possibilities
| Name | Gene | Dev stage | Location | Assay type | Expression type | Pattern similarity | Gene homologs/ paralogs | Sequence | Genotype | SQL acces | Gene function | Author | Spatial location |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GEISHA | + | + | + | − | − | − | − | − | − | − | − | + | − |
| MEPD | + | + | + | − | +a | − | +b | + | − | − | − | − | − |
| EMAP/EMAGE | + | + | + | − | − | + | − | − | + | + | − | − | + |
| GenePaint.org | + | + | + | − | − | − | +b | + | −c | − | − | − | − |
| GENSAT | + | + | +d | + | + | − | − | − | − | − | − | − | − |
| GUDMAP | + | + | + | + | + | − | − | − | − | − | +e | − | − |
| GXD | + | + | + | + | − | − | + | + | + | + | +e | + | +f |
| EURExpress | + | − | + | − | − | − | − | + | − | − | − | − | − |
| EuReGeneDb | + | − | + | − | − | − | − | − | − | − | − | − | +f |
| XGEbase | + | + | + | − | − | − | − | − | − | − | − | − | +f |
| ZFIN | + | + | + | + | − | − | − | − | + | − | − | + | − |
The search possibilities offered by the atlases are coded as present (+) or absent (−).
aStrength and pattern.
bVia sequence/BLAST search.
cOnly on strain.
dAlso celltype.
eVia GO annotation.
fVia annotated image.