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Comparison of scan statistic regions with single-SNP tests for HDL having p-values < 10-4
| Scan statistic regions | ||||
|---|---|---|---|---|
| Single-SNP | Non-gene | Gene | SNPs missed by scan statistic regions |
SNP totals |
| Inter-gene SNP | 29 | 18 | 172 | 219 |
| Within-gene SNP | 0 | 35 | 146 | 181 |
| Total no. SNPs | 29 | 53 | 318 | 400 |
