Table 1.
Candidate genes, associated genes/regions and number of SNPs (#s) in each
| Gene | Chr | No. SNPs |
|---|---|---|
| TNFRSF1B | 1 | 17 |
| PADI4 | 1 | 8 |
| PTPN22 | 1 | 10 |
| FCRL3 | 1 | 10 |
| FCGR3A | 1 | 3 |
| FCGR3B | 1 | 4 |
| IL10 | 1 | 6 |
| IL1A | 2 | 3 |
| IL1B | 2 | 9 |
| ITGAV | 2 | 27 |
| STAT4 | 2 | 2 |
| CTLA4 | 2 | 5 |
| BTLA | 3 | 2 |
| IL3 | 5 | 2 |
| SLC22A4 | 5 | 15 |
| IL13 | 5 | 4 |
| IL4 | 5 | 5 |
| HAVCR1 | 5 | 11 |
| 6p21.3 | 6 | 1702 |
| MICA | 6 | 230 |
| HLA-C | 6 | 20 |
| NFKBIL1 | 6 | 11 |
| LTA | 6 | 6 |
| TNF | 6 | 5 |
| HLA-DR | 6 | 21 |
| VEGFA | 6 | 6 |
| 6q23 | 6 | 1841 |
| OLIG3 | 6 | 2 |
| TNFAIP3 | 6 | 5 |
| IL6 | 7 | 2 |
| IRF5 | 7 | 4 |
| C5 | 9 | 8 |
| DLG5 | 10 | 20 |
| MS4A1 | 11 | 12 |
| MHC2TA | 16 | 7 |
| CARD15 | 16 | 10 |
| RUNX1 | 21 | 3044 |
| MIF | 22 | 12 |