Table 4.

The two-variable interactions with KWII values ≥ 95^th percentile (0.01) obtained using SNPs on gene × gene pairs on Data Set 1

SNP1-SNP2	Gene/genome region 1 - Gene/genome region 2	KWII	p-Valuea
rs9275596-rs1542876	6p21.3-RUNX1	0.01914	2.05 × 10-6
rs2856725-rs1542876	6p21.3-RUNX1	0.01743	3.61 × 10-5
rs9275596-rs1041778	6p21.3-RUNX1	0.01471	8.25 × 10-7
rs7770216-rs563495	6p21.3-6q23	0.01444	4.15 × 10-7
rs7755852-rs2745443	6p21.3-6q23	0.01275	6.22 × 10-7
rs9275698-rs1883468	6p21.3-6q23	0.01262	4.51 × 10-7
rs4673260-rs12190331	CTLA4-6q23	0.01385	7.86 × 10-8
rs1206684-rs651084	6q23-RUNX1	0.01261	6.12 × 10-5
rs2844729-rs16984549	6p21.3-RUNX1	0.01255	5.71 × 10-7
rs2856725-rs1041778	6p21.3-RUNX1	0.01247	6.54 × 10-6

^a p-Value obtained using logistic regression.