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. 2009 Dec 15;3(Suppl 7):S81. doi: 10.1186/1753-6561-3-s7-s81

Table 1.

Top ten pair-wise interaction results among SNPs with main-effects p-values < 1 × 10-4 from logistic regression models

SNP 1 Chr Position (1,000 bp) Closest gene SNP 2 Chr Position (1,000 bp) Closest gene Interaction p-value
rs1333914 9 121623 DBC1 rs9391858a 6 32449 C6orf10 5.7 × 10-5
rs9368950 6 36736 CDKN1A rs9408926 9 122955 CEP110 5.7 × 10-5
rs3873444 6 32791 HLA-DQA2 rs17172185 7 43253 HECW1 1.1 × 10-4
rs9368950 6 36736 CDKN1A rs9408928 9 122992 RAB14 1.9 × 10-4
rs7679231 4 137102 PCDH18 rs8017455 14 80645 TSHR 2.4 × 10-4
rs532098 6 32686 HLA-DRB1 rs660895a 6 32685 HLA-DRB1 2.6 × 10-4
rs4674520 2 201422 CLK1 rs2524123a 6 31373 HLA-C 3.3 × 10-4
rs10948693 6 52262 MCM3 rs7330752 13 29755 KATNAL1 3.8 × 10-4
rs4674520 2 201427 CLK1 rs10948693 6 52262 MCM3 4.0 × 10-4

aSNPs from the adjusted model