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. Author manuscript; available in PMC: 2009 Dec 22.
Published in final edited form as: Am J Trop Med Hyg. 2006 Dec;75(6):1127–1134.

Table 4.

Sequence similarity of the S-segment among American hantaviruses

Virus Paraguayan South American North American



ALP ÑEB AAI IP37 IP38 LN RM ORN AH1 CHL BMJ LEC MAC PRG CD BAY BCC MUL RS SN
ALP 79 78 79 79 79 82 78 79 79 78 79 77 78 69 77 77 76 71 76
BMJ-ÑEB 88 76 82 82 81 80 87 83 83 93 90 82 82 69 77 78 77 69 76
AAI 89 86 77 78 77 78 76 77 77 75 77 77 76 75 77 76 75 73 75
IP37 89 95 87 99 79 79 84 82 82 83 83 80 81 72 78 77 76 71 76
IP38 89 95 87 100 79 80 84 83 82 83 83 80 82 73 78 77 76 71 77
LN 92 89 86 90 90 82 79 79 79 79 80 78 78 66 78 77 76 68 75
RM 96 90 89 90 90 93 81 80 81 80 80 78 79 68 77 77 77 68 76
ORN 89 98 86 96 97 90 91 84 84 87 87 82 83 70 78 76 76 68 76
AH1 89 96 87 95 95 90 91 97 94 84 84 81 82 72 77 76 77 70 77
CHL 89 96 87 95 95 90 91 96 100 84 84 81 82 69 77 76 76 69 76
BMJ 89 99 87 96 96 90 90 99 97 96 92 82 82 70 77 78 77 67 77
LEC 89 99 87 95 96 90 91 98 96 96 100 82 83 72 77 78 77 68 77
MAC 89 94 86 93 93 88 89 95 94 94 94 94 83 66 76 77 76 66 77
PRG 89 95 85 93 93 90 90 96 95 95 96 96 96 68 77 76 76 68 75
CD 83 83 82 83 84 82 83 83 84 84 84 84 82 82 75 73 74 74 74
BAY 88 88 86 87 88 87 88 89 88 88 89 88 88 88 81 81 80 68 76
BCC 87 86 84 85 86 86 87 86 86 87 86 86 86 86 80 92 81 67 75
MUL 86 84 82 84 84 85 86 85 86 86 85 85 86 86 80 93 90 63 76
RS 81 82 80 81 81 81 82 82 82 82 82 82 82 81 79 84 82 81 69
SN 84 86 85 86 86 85 84 86 86 86 87 86 85 85 82 86 83 82 83