Table 1.
Name | Primer /probe |
Reporter Dye | Sequence (5'-3') | Quencher |
---|---|---|---|---|
FUN1 | Primer | - | GGCATCGATGGGTTAATCATG | - |
VAN1 | Primer | - | AAACCCCAAGATGTGCTCC | - |
VAN3 | primer | - | GGTTTTCAAATGAATCTC | - |
N PAR | Primer | - | ATACTTGTGTGTGTGTGTATTTG | - |
RIV TM | probe | Cy5 | CTATGGCGAGACCCCGTCTAGTG | BHQ2a |
FUN TM | probe | ROX | CATGGGGAAATTCAATCGAAAACCTCT | BHQ2a |
PAR TM | probe | VIC | CGG AAC CTA GCT TGG | MGBNFQb |
VAN TM | probe | Quasar 705 | CGT TGT GAA AAA TGG AGA TTC ATT TGA AAA CC | BHQ2a |
LEES TM | probe | 6-FAM | CCG ACC GAT GTA CA | MGBNFQb |
aBHQ2 (black hole quencher 2)
bMGBNFQ (minor groove binder non-fluorescent quencher)